Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm27974-201ENSMUST00000183415 105 ntBASIC0.9□□□□□ -2.27
Chd4Q6PDQ2 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Chd4Q6PDQ2 Gm44396-201ENSMUST00000199843 114 ntBASIC0.9□□□□□ -2.27
Chd4Q6PDQ2 Mir488-201ENSMUST00000093595 109 ntBASIC0.9□□□□□ -2.27
Chd4Q6PDQ2 Gm25943-201ENSMUST00000103791 90 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm25364-201ENSMUST00000158851 107 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm25285-201ENSMUST00000178951 90 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir6364-201ENSMUST00000183396 86 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Mir101a-201ENSMUST00000083517 83 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm22576-201ENSMUST00000083733 104 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm16307-201ENSMUST00000161269 210 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm27694-201ENSMUST00000184740 86 ntBASIC0.89□□□□□ -2.27
Chd4Q6PDQ2 Gm24467-201ENSMUST00000157887 126 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 Gm27934-201ENSMUST00000158795 63 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 Mir468-201ENSMUST00000197332 78 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 Mir30a-201ENSMUST00000083471 71 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.88□□□□□ -2.27
Chd4Q6PDQ2 Gm24777-201ENSMUST00000157644 107 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm27607-201ENSMUST00000185162 122 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm37997-201ENSMUST00000193515 267 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm25497-201ENSMUST00000104425 132 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm22373-201ENSMUST00000104584 89 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm25110-201ENSMUST00000116684 121 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm25775-201ENSMUST00000116716 121 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm24795-201ENSMUST00000116737 121 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Gm25171-201ENSMUST00000116926 121 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.87□□□□□ -2.27
Chd4Q6PDQ2 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Gm24772-201ENSMUST00000158507 110 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Gm8219-201ENSMUST00000218309 242 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Snord47-201ENSMUST00000083034 77 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Gm25410-201ENSMUST00000083758 137 ntBASIC0.86□□□□□ -2.27
Chd4Q6PDQ2 Gm24555-201ENSMUST00000104548 124 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm14626-201ENSMUST00000117619 216 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm20386-201ENSMUST00000174010 132 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm22801-201ENSMUST00000175624 84 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 AL929417.1-201ENSMUST00000214901 124 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm8508-201ENSMUST00000061226 363 ntBASIC0.85□□□□□ -2.27
Chd4Q6PDQ2 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Gm23567-201ENSMUST00000178005 107 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Gm27446-201ENSMUST00000183963 89 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Mir7657-201ENSMUST00000196051 57 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Mir489-201ENSMUST00000093599 107 ntBASIC0.84□□□□□ -2.27
Chd4Q6PDQ2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
Chd4Q6PDQ2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm24750-201ENSMUST00000157843 104 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm25375-201ENSMUST00000158157 135 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm25716-201ENSMUST00000158628 104 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Mir1961-201ENSMUST00000158643 112 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm23461-201ENSMUST00000083265 107 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Mir1298-201ENSMUST00000116681 98 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm15654-201ENSMUST00000152660 300 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm22967-201ENSMUST00000157956 239 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm22431-201ENSMUST00000158545 107 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm43898-201ENSMUST00000204456 424 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Snora41-201ENSMUST00000082668 132 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Snord61-201ENSMUST00000083176 71 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm24457-201ENSMUST00000083196 105 ntBASIC0.83□□□□□ -2.28
Chd4Q6PDQ2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Chd4Q6PDQ2 Snord32a-201ENSMUST00000083285 83 ntBASIC0.82□□□□□ -2.28
Chd4Q6PDQ2 Gm25544-201ENSMUST00000122676 120 ntBASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Mir33-201ENSMUST00000083531 69 ntBASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Gm23180-201ENSMUST00000158686 125 ntBASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Mir3969-201ENSMUST00000197106 92 ntBASIC0.81□□□□□ -2.28
Chd4Q6PDQ2 Gm26076-201ENSMUST00000104065 105 ntBASIC0.8□□□□□ -2.28
Chd4Q6PDQ2 Gm42623-201ENSMUST00000197225 379 ntBASIC0.8□□□□□ -2.28
Chd4Q6PDQ2 Gm44948-201ENSMUST00000209050 149 ntBASIC0.8□□□□□ -2.28
Chd4Q6PDQ2 DQ267101-201ENSMUST00000082562 73 ntBASIC0.8□□□□□ -2.28
Chd4Q6PDQ2 Gm23320-201ENSMUST00000104462 127 ntBASIC0.79□□□□□ -2.28
Chd4Q6PDQ2 Gm25610-201ENSMUST00000104016 129 ntBASIC0.79□□□□□ -2.28
Chd4Q6PDQ2 Gm22790-201ENSMUST00000157229 129 ntBASIC0.79□□□□□ -2.28
Chd4Q6PDQ2 Gm27928-201ENSMUST00000183747 256 ntBASIC0.79□□□□□ -2.28
Chd4Q6PDQ2 Gm44807-201ENSMUST00000206115 154 ntBASIC0.79□□□□□ -2.28
Chd4Q6PDQ2 Gm23772-201ENSMUST00000104433 102 ntBASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Gm6985-201ENSMUST00000121255 271 ntBASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Gm22079-201ENSMUST00000157592 106 ntBASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Gm23864-201ENSMUST00000177607 107 ntBASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Chd4Q6PDQ2 Gm26274-201ENSMUST00000157103 321 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms