Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm22454-201ENSMUST00000082583 107 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm22827-201ENSMUST00000083766 107 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm25681-201ENSMUST00000083938 106 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm22319-201ENSMUST00000157147 122 ntBASIC1.95□□□□□ -2.1
Shkbp1Q6P7W2 Gm23384-201ENSMUST00000158593 103 ntBASIC1.95□□□□□ -2.1
Shkbp1Q6P7W2 Traj61-201ENSMUST00000165025 72 ntBASIC1.95□□□□□ -2.1
Shkbp1Q6P7W2 Gm23790-201ENSMUST00000083013 107 ntBASIC1.95□□□□□ -2.1
Shkbp1Q6P7W2 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm22679-201ENSMUST00000116975 100 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm11856-201ENSMUST00000118712 276 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm26090-201ENSMUST00000157897 128 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm23813-201ENSMUST00000175153 77 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm24638-201ENSMUST00000179807 132 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm24044-201ENSMUST00000083107 156 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Mir451a-201ENSMUST00000093557 72 ntBASIC1.94□□□□□ -2.1
Shkbp1Q6P7W2 Gm22494-201ENSMUST00000104495 128 ntBASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Gm22556-201ENSMUST00000157803 100 ntBASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Mir6905-201ENSMUST00000184228 70 ntBASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Mir3087-201ENSMUST00000199405 56 ntBASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Gm24697-201ENSMUST00000083881 107 ntBASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Shkbp1Q6P7W2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Gm22554-201ENSMUST00000157798 147 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Gm25636-201ENSMUST00000082666 133 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Shkbp1Q6P7W2 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm25680-201ENSMUST00000116917 126 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm22635-201ENSMUST00000116962 126 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm23656-201ENSMUST00000122626 112 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm23601-201ENSMUST00000157259 131 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm22963-201ENSMUST00000157960 91 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm23996-201ENSMUST00000158062 131 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm42795-201ENSMUST00000198847 76 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm43977-201ENSMUST00000203970 189 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm24524-201ENSMUST00000082925 170 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.91□□□□□ -2.1
Shkbp1Q6P7W2 Gm22770-201ENSMUST00000158368 67 ntBASIC1.9□□□□□ -2.11
Shkbp1Q6P7W2 Gm20477-201ENSMUST00000174028 280 ntBASIC1.9□□□□□ -2.11
Shkbp1Q6P7W2 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.9□□□□□ -2.11
Shkbp1Q6P7W2 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.9□□□□□ -2.11
Shkbp1Q6P7W2 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Gm22069-201ENSMUST00000179911 107 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Gm37557-201ENSMUST00000191640 139 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Snora3-201ENSMUST00000083082 132 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Gm22354-201ENSMUST00000083919 70 ntBASIC1.89□□□□□ -2.11
Shkbp1Q6P7W2 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm23986-201ENSMUST00000157144 63 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm22129-201ENSMUST00000179034 107 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Mir7021-201ENSMUST00000197026 63 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm3724-201ENSMUST00000197957 349 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm44807-201ENSMUST00000206115 154 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm45471-201ENSMUST00000211270 281 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm25788-201ENSMUST00000082721 131 ntBASIC1.88□□□□□ -2.11
Shkbp1Q6P7W2 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm25611-201ENSMUST00000104017 133 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm25832-201ENSMUST00000104140 130 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm25279-201ENSMUST00000122608 133 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm26213-201ENSMUST00000158582 110 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm25750-201ENSMUST00000175483 112 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm27544-201ENSMUST00000185069 155 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Gm37778-201ENSMUST00000191732 190 ntBASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Shkbp1Q6P7W2 Mir301b-201ENSMUST00000102333 97 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm25610-201ENSMUST00000104016 129 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm25370-201ENSMUST00000158159 94 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm24076-201ENSMUST00000158179 94 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm23349-201ENSMUST00000158432 98 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Mir21c-201ENSMUST00000184910 78 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm25820-201ENSMUST00000198589 127 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Gm22866-201ENSMUST00000083947 177 ntBASIC1.86□□□□□ -2.11
Shkbp1Q6P7W2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm25045-201ENSMUST00000122670 99 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm23469-201ENSMUST00000157131 104 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm22551-201ENSMUST00000157795 103 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm22515-201ENSMUST00000158273 305 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Mir6379-201ENSMUST00000183392 115 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm26123-201ENSMUST00000083363 135 ntBASIC1.85□□□□□ -2.11
Shkbp1Q6P7W2 Gm14882-201ENSMUST00000117216 218 ntBASIC1.84□□□□□ -2.11
Shkbp1Q6P7W2 Gm22815-201ENSMUST00000157451 62 ntBASIC1.84□□□□□ -2.11
Shkbp1Q6P7W2 Gm22706-201ENSMUST00000157907 112 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 1004.3 ms