Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.82□□□□□ -2.7
Ubr3Q5U430 Gm11936-201ENSMUST00000118323 160 ntBASIC-1.82□□□□□ -2.7
Ubr3Q5U430 Gm24649-201ENSMUST00000157106 134 ntBASIC-1.82□□□□□ -2.7
Ubr3Q5U430 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.82□□□□□ -2.7
Ubr3Q5U430 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.82□□□□□ -2.7
Ubr3Q5U430 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.83□□□□□ -2.7
Ubr3Q5U430 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.83□□□□□ -2.7
Ubr3Q5U430 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-1.83□□□□□ -2.7
Ubr3Q5U430 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm25670-201ENSMUST00000178423 107 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm26239-201ENSMUST00000178842 107 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm24292-201ENSMUST00000082888 107 ntBASIC-1.84□□□□□ -2.7
Ubr3Q5U430 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm25559-201ENSMUST00000157182 74 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm23568-201ENSMUST00000177960 92 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm24897-201ENSMUST00000179033 107 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm24829-201ENSMUST00000179245 92 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm25473-201ENSMUST00000180191 107 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Platr25-208ENSMUST00000222602 939 ntBASIC-1.85□□□□□ -2.71
Ubr3Q5U430 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.86□□□□□ -2.71
Ubr3Q5U430 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.87□□□□□ -2.71
Ubr3Q5U430 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.88□□□□□ -2.71
Ubr3Q5U430 Gm24960-201ENSMUST00000157923 90 ntBASIC-1.88□□□□□ -2.71
Ubr3Q5U430 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.88□□□□□ -2.71
Ubr3Q5U430 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.88□□□□□ -2.71
Ubr3Q5U430 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.88□□□□□ -2.71
Ubr3Q5U430 Gm23901-201ENSMUST00000157570 107 ntBASIC-1.89□□□□□ -2.71
Ubr3Q5U430 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.89□□□□□ -2.71
Ubr3Q5U430 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.9□□□□□ -2.71
Ubr3Q5U430 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
Ubr3Q5U430 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.91□□□□□ -2.72
Ubr3Q5U430 Mir7657-201ENSMUST00000196051 57 ntBASIC-1.91□□□□□ -2.72
Ubr3Q5U430 Gm12785-201ENSMUST00000122052 172 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm24006-201ENSMUST00000158462 132 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm26143-201ENSMUST00000104480 108 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm25078-201ENSMUST00000082530 107 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.92□□□□□ -2.72
Ubr3Q5U430 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Gm27926-201ENSMUST00000157180 66 ntBASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Gm24818-201ENSMUST00000175093 161 ntBASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Gm25930-201ENSMUST00000082785 107 ntBASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.93□□□□□ -2.72
Ubr3Q5U430 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Snord2-201ENSMUST00000157899 69 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Mir218-1-201ENSMUST00000083669 110 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm25313-201ENSMUST00000101817 116 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm23287-201ENSMUST00000179427 116 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm23143-201ENSMUST00000180137 116 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm24871-201ENSMUST00000083099 116 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Rnu5g-201ENSMUST00000093721 116 ntBASIC-1.94□□□□□ -2.72
Ubr3Q5U430 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-1.95□□□□□ -2.72
Ubr3Q5U430 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.95□□□□□ -2.72
Ubr3Q5U430 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.95□□□□□ -2.72
Ubr3Q5U430 Gm45403-201ENSMUST00000209453 276 ntBASIC-1.95□□□□□ -2.72
Ubr3Q5U430 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-1.95□□□□□ -2.72
Ubr3Q5U430 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.96□□□□□ -2.72
Ubr3Q5U430 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
Ubr3Q5U430 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.97□□□□□ -2.72
Ubr3Q5U430 Gm23900-201ENSMUST00000157569 108 ntBASIC-1.97□□□□□ -2.72
Ubr3Q5U430 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.97□□□□□ -2.72
Ubr3Q5U430 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.97□□□□□ -2.72
Ubr3Q5U430 Gm23492-201ENSMUST00000116837 115 ntBASIC-1.97□□□□□ -2.73
Ubr3Q5U430 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.97□□□□□ -2.73
Ubr3Q5U430 Gm23411-201ENSMUST00000157988 62 ntBASIC-1.97□□□□□ -2.73
Ubr3Q5U430 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.97□□□□□ -2.73
Ubr3Q5U430 Gm24340-201ENSMUST00000104208 97 ntBASIC-1.98□□□□□ -2.73
Ubr3Q5U430 Gm24577-201ENSMUST00000158580 63 ntBASIC-1.98□□□□□ -2.73
Ubr3Q5U430 Gm23093-201ENSMUST00000083450 102 ntBASIC-1.98□□□□□ -2.73
Ubr3Q5U430 Gm25207-201ENSMUST00000093745 107 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 76,532 protein–RNA pairs in 1733.8 ms