Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm23016-201ENSMUST00000158431 62 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26180-201ENSMUST00000179942 107 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 AC116589.4-201ENSMUST00000222390 216 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26495-201ENSMUST00000083152 137 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 Gm23142-201ENSMUST00000101848 105 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm26240-201ENSMUST00000101893 105 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm22553-201ENSMUST00000157797 295 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Snora26-201ENSMUST00000175614 121 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm22166-201ENSMUST00000178419 121 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23288-201ENSMUST00000179213 121 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Snora19-201ENSMUST00000082962 132 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23658-201ENSMUST00000083233 132 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-1.29□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.3□□□□□ -2.62
Trav6d-4Q5R1I0 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm14301-201ENSMUST00000120181 324 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm28648-201ENSMUST00000190092 343 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.31□□□□□ -2.62
Trav6d-4Q5R1I0 Mir759-201ENSMUST00000103254 98 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23111-201ENSMUST00000122652 105 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm25586-201ENSMUST00000082499 112 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm26168-201ENSMUST00000083787 112 ntBASIC-1.32□□□□□ -2.62
Trav6d-4Q5R1I0 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm13345-201ENSMUST00000121928 228 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm24037-201ENSMUST00000082871 180 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm25579-201ENSMUST00000083407 106 ntBASIC-1.33□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.34□□□□□ -2.62
Trav6d-4Q5R1I0 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.34□□□□□ -2.62
Trav6d-4Q5R1I0 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.34□□□□□ -2.62
Trav6d-4Q5R1I0 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.34□□□□□ -2.62
Trav6d-4Q5R1I0 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24275-201ENSMUST00000116780 146 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23660-201ENSMUST00000178362 79 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24088-201ENSMUST00000179100 79 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm25450-201ENSMUST00000179144 107 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm45402-201ENSMUST00000211796 223 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.35□□□□□ -2.63
Trav6d-4Q5R1I0 Gm26482-201ENSMUST00000158015 62 ntBASIC-1.36□□□□□ -2.63
Trav6d-4Q5R1I0 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.36□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24453-201ENSMUST00000083346 76 ntBASIC-1.36□□□□□ -2.63
Trav6d-4Q5R1I0 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22433-201ENSMUST00000158550 142 ntBASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Gm7240-201ENSMUST00000220769 664 ntBASIC-1.37□□□□□ -2.63
Trav6d-4Q5R1I0 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22542-201ENSMUST00000158166 95 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 AC102369.1-201ENSMUST00000218415 373 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23448-201ENSMUST00000083151 104 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.38□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm14574-201ENSMUST00000120644 279 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22332-201ENSMUST00000158072 126 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23474-201ENSMUST00000158884 75 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Gm44395-201ENSMUST00000197056 153 ntBASIC-1.39□□□□□ -2.63
Trav6d-4Q5R1I0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm22598-201ENSMUST00000157600 127 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm44959-201ENSMUST00000209127 231 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Mir496a-201ENSMUST00000093627 79 ntBASIC-1.4□□□□□ -2.63
Trav6d-4Q5R1I0 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-1.41□□□□□ -2.64
Trav6d-4Q5R1I0 Gm25769-201ENSMUST00000158569 127 ntBASIC-1.41□□□□□ -2.64
Trav6d-4Q5R1I0 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.41□□□□□ -2.64
Trav6d-4Q5R1I0 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.41□□□□□ -2.64
Trav6d-4Q5R1I0 Gm29818-201ENSMUST00000218070 165 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 211.9 ms