Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC-0.32□□□□□ -2.46
Upf3bQ3ULL6 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.32□□□□□ -2.46
Upf3bQ3ULL6 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-0.32□□□□□ -2.46
Upf3bQ3ULL6 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.32□□□□□ -2.46
Upf3bQ3ULL6 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm25664-201ENSMUST00000157697 107 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm42594-201ENSMUST00000199511 246 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Mir18-201ENSMUST00000083469 96 ntBASIC-0.33□□□□□ -2.46
Upf3bQ3ULL6 Gm22051-201ENSMUST00000117002 127 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Gm26287-201ENSMUST00000158887 81 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Gm22448-201ENSMUST00000179254 107 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 AC154552.1-201ENSMUST00000222969 202 ntBASIC-0.34□□□□□ -2.46
Upf3bQ3ULL6 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.35□□□□□ -2.47
Upf3bQ3ULL6 Gm37404-201ENSMUST00000195726 359 ntBASIC-0.35□□□□□ -2.47
Upf3bQ3ULL6 Gm44858-201ENSMUST00000207360 154 ntBASIC-0.35□□□□□ -2.47
Upf3bQ3ULL6 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.35□□□□□ -2.47
Upf3bQ3ULL6 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Mir5624-201ENSMUST00000176635 61 ntBASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Upf3bQ3ULL6 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Gm14301-201ENSMUST00000120181 324 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.37□□□□□ -2.47
Upf3bQ3ULL6 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.38□□□□□ -2.47
Upf3bQ3ULL6 Gm28008-201ENSMUST00000184021 186 ntBASIC-0.38□□□□□ -2.47
Upf3bQ3ULL6 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC-0.38□□□□□ -2.47
Upf3bQ3ULL6 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.38□□□□□ -2.47
Upf3bQ3ULL6 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.38□□□□□ -2.47
Upf3bQ3ULL6 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.39□□□□□ -2.47
Upf3bQ3ULL6 Gm23941-201ENSMUST00000101953 107 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Mir7227-201ENSMUST00000200408 59 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.4□□□□□ -2.47
Upf3bQ3ULL6 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Gm12924-201ENSMUST00000121747 318 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.41□□□□□ -2.48
Upf3bQ3ULL6 Gm24423-201ENSMUST00000101982 106 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm23219-201ENSMUST00000158123 87 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.42□□□□□ -2.48
Upf3bQ3ULL6 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm25235-201ENSMUST00000179933 107 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Snora75-201ENSMUST00000082903 133 ntBASIC-0.43□□□□□ -2.48
Upf3bQ3ULL6 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.44□□□□□ -2.48
Upf3bQ3ULL6 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.44□□□□□ -2.48
Upf3bQ3ULL6 Gm27521-201ENSMUST00000184022 64 ntBASIC-0.44□□□□□ -2.48
Upf3bQ3ULL6 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.45□□□□□ -2.48
Upf3bQ3ULL6 Snord100-201ENSMUST00000116836 74 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 139.9 ms