Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Mir7225-201ENSMUST00000184178 54 ntBASIC1.9□□□□□ -2.11
Usp39Q3TIX9 Snora20-201ENSMUST00000082703 128 ntBASIC1.9□□□□□ -2.11
Usp39Q3TIX9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.9□□□□□ -2.11
Usp39Q3TIX9 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.9□□□□□ -2.11
Usp39Q3TIX9 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Gm22545-201ENSMUST00000104350 132 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Gm22515-201ENSMUST00000158273 305 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Gm45268-201ENSMUST00000210046 370 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Mir429-201ENSMUST00000083493 83 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Gm22354-201ENSMUST00000083919 70 ntBASIC1.89□□□□□ -2.11
Usp39Q3TIX9 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Usp39Q3TIX9 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.88□□□□□ -2.11
Usp39Q3TIX9 Gm23384-201ENSMUST00000158593 103 ntBASIC1.88□□□□□ -2.11
Usp39Q3TIX9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.88□□□□□ -2.11
Usp39Q3TIX9 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.88□□□□□ -2.11
Usp39Q3TIX9 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm25045-201ENSMUST00000122670 99 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Traj61-201ENSMUST00000165025 72 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm25996-201ENSMUST00000175393 117 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm27443-201ENSMUST00000184660 98 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm42795-201ENSMUST00000198847 76 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm6109-201ENSMUST00000223297 348 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Mir451a-201ENSMUST00000093557 72 ntBASIC1.87□□□□□ -2.11
Usp39Q3TIX9 Gm15692-201ENSMUST00000152173 352 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm24478-201ENSMUST00000157439 158 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm24238-201ENSMUST00000157792 98 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm22129-201ENSMUST00000179034 107 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm43977-201ENSMUST00000203970 189 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm26922-201ENSMUST00000082687 72 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Gm24524-201ENSMUST00000082925 170 ntBASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Usp39Q3TIX9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Usp39Q3TIX9 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm16328-201ENSMUST00000126985 196 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm26090-201ENSMUST00000157897 128 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm25370-201ENSMUST00000158159 94 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm23813-201ENSMUST00000175153 77 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Gm21885-201ENSMUST00000178891 327 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.85□□□□□ -2.11
Usp39Q3TIX9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Mir758-201ENSMUST00000103260 81 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Mir880-201ENSMUST00000104809 78 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Gm22963-201ENSMUST00000157960 91 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Mir6901-201ENSMUST00000185062 62 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 AC122327.1-201ENSMUST00000220778 108 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.84□□□□□ -2.11
Usp39Q3TIX9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
Usp39Q3TIX9 Gm23109-201ENSMUST00000116867 126 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Gm24907-201ENSMUST00000116932 128 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Gm22983-201ENSMUST00000158308 104 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Gm25658-201ENSMUST00000158472 128 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Gm24770-201ENSMUST00000158505 92 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Mir669n-201ENSMUST00000158636 54 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 Mir410-201ENSMUST00000083563 81 ntBASIC1.83□□□□□ -2.12
Usp39Q3TIX9 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.82□□□□□ -2.12
Usp39Q3TIX9 Gm23601-201ENSMUST00000157259 131 ntBASIC1.82□□□□□ -2.12
Usp39Q3TIX9 Gm23351-201ENSMUST00000158427 125 ntBASIC1.82□□□□□ -2.12
Usp39Q3TIX9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
Usp39Q3TIX9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Gm22999-201ENSMUST00000157082 88 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 U6.1-201ENSMUST00000157443 101 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Gm23996-201ENSMUST00000158062 131 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Gm20477-201ENSMUST00000174028 280 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Gm45471-201ENSMUST00000211270 281 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Snora3-201ENSMUST00000083082 132 ntBASIC1.81□□□□□ -2.12
Usp39Q3TIX9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm22071-201ENSMUST00000116857 83 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm24394-201ENSMUST00000158141 123 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm23349-201ENSMUST00000158432 98 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm20391-201ENSMUST00000174722 106 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm25633-201ENSMUST00000178565 107 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm22805-201ENSMUST00000082739 107 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.8□□□□□ -2.12
Usp39Q3TIX9 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Usp39Q3TIX9 Gm23766-201ENSMUST00000103894 80 ntBASIC1.79□□□□□ -2.12
Usp39Q3TIX9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.79□□□□□ -2.12
Usp39Q3TIX9 Gm23986-201ENSMUST00000157144 63 ntBASIC1.79□□□□□ -2.12
Usp39Q3TIX9 Mir21c-201ENSMUST00000184910 78 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms