Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Gm24000-201ENSMUST00000158063 89 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Gm23817-201ENSMUST00000158449 104 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Gm24668-201ENSMUST00000158935 104 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Gm23267-201ENSMUST00000178490 132 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Gm27511-201ENSMUST00000183502 127 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Mir6351-201ENSMUST00000183826 99 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Mir429-201ENSMUST00000083493 83 ntBASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.63□□□□□ -2.15
Col28a1Q2UY11 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm26080-201ENSMUST00000104069 131 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm11792-201ENSMUST00000120640 168 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm16265-201ENSMUST00000134558 108 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm26104-201ENSMUST00000157250 108 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm22228-201ENSMUST00000157364 101 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm23181-201ENSMUST00000158685 110 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm26073-201ENSMUST00000179906 127 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm27248-201ENSMUST00000184004 166 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm45754-201ENSMUST00000212380 279 ntBASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.62□□□□□ -2.15
Col28a1Q2UY11 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 Gm22761-201ENSMUST00000102278 96 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 Gm12309-201ENSMUST00000119889 182 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 Gm24851-201ENSMUST00000158028 103 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 Gm25788-201ENSMUST00000082721 131 ntBASIC1.61□□□□□ -2.15
Col28a1Q2UY11 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Gm23083-201ENSMUST00000157851 116 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Gm20409-201ENSMUST00000173457 130 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Gm23967-201ENSMUST00000175062 78 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Gm24333-201ENSMUST00000175101 84 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Snora20-201ENSMUST00000082703 128 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Gm25855-201ENSMUST00000082787 72 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Mir490-201ENSMUST00000093567 84 ntBASIC1.6□□□□□ -2.15
Col28a1Q2UY11 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm25068-201ENSMUST00000103895 110 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Snord78-201ENSMUST00000104032 66 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm22772-201ENSMUST00000104451 121 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm23652-201ENSMUST00000116752 107 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm14674-201ENSMUST00000117816 342 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm26253-201ENSMUST00000122493 103 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Mir3083-201ENSMUST00000175377 64 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.59□□□□□ -2.15
Col28a1Q2UY11 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Gm22743-201ENSMUST00000083445 133 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Mir411-201ENSMUST00000083543 82 ntBASIC1.59□□□□□ -2.15
Col28a1Q2UY11 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col28a1Q2UY11 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Gm22999-201ENSMUST00000157082 88 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Gm24238-201ENSMUST00000157792 98 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Gm22888-201ENSMUST00000158640 77 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Mir6388-201ENSMUST00000184417 75 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Snora41-201ENSMUST00000082668 132 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Col28a1Q2UY11 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.57□□□□□ -2.16
Col28a1Q2UY11 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.57□□□□□ -2.16
Col28a1Q2UY11 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.57□□□□□ -2.16
Col28a1Q2UY11 Gm45268-201ENSMUST00000210046 370 ntBASIC1.57□□□□□ -2.16
Col28a1Q2UY11 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.57□□□□□ -2.16
Col28a1Q2UY11 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm22545-201ENSMUST00000104350 132 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm26051-201ENSMUST00000104642 93 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Mir880-201ENSMUST00000104809 78 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm24379-201ENSMUST00000122695 86 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm25289-201ENSMUST00000122799 119 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm24947-201ENSMUST00000158334 110 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm5900-201ENSMUST00000179862 375 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm24406-201ENSMUST00000083026 128 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm24099-201ENSMUST00000083384 107 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm24412-201ENSMUST00000083426 109 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Mir107-201ENSMUST00000083660 87 ntBASIC1.56□□□□□ -2.16
Col28a1Q2UY11 Gm11856-201ENSMUST00000118712 276 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm25279-201ENSMUST00000122608 133 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm23656-201ENSMUST00000122626 112 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm25887-201ENSMUST00000157777 84 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm24174-201ENSMUST00000158933 111 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm20477-201ENSMUST00000174028 280 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm21885-201ENSMUST00000178891 327 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Gm43206-201ENSMUST00000197990 114 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Mir148b-201ENSMUST00000083626 97 ntBASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col28a1Q2UY11 Mir873a-201ENSMUST00000104863 77 ntBASIC1.54□□□□□ -2.16
Col28a1Q2UY11 Gm24222-201ENSMUST00000158834 93 ntBASIC1.54□□□□□ -2.16
Col28a1Q2UY11 Gm27722-201ENSMUST00000183908 76 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms