Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm23788-201ENSMUST00000122535 106 ntBASIC2.42□□□□□ -2.02
Col6a1Q04857 Mir7232-201ENSMUST00000197929 74 ntBASIC2.42□□□□□ -2.02
Col6a1Q04857 Gm26922-201ENSMUST00000082687 72 ntBASIC2.42□□□□□ -2.02
Col6a1Q04857 Mir300-201ENSMUST00000083485 79 ntBASIC2.42□□□□□ -2.02
Col6a1Q04857 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col6a1Q04857 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.42□□□□□ -2.02
Col6a1Q04857 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm14588-201ENSMUST00000119895 172 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm26280-201ENSMUST00000157096 101 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm22556-201ENSMUST00000157803 100 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm24076-201ENSMUST00000158179 94 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Mir6388-201ENSMUST00000184417 75 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Mir3069-201ENSMUST00000198802 65 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm43977-201ENSMUST00000203970 189 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm25855-201ENSMUST00000082787 72 ntBASIC2.41□□□□□ -2.02
Col6a1Q04857 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a1Q04857 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col6a1Q04857 Gm25680-201ENSMUST00000116917 126 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm22635-201ENSMUST00000116962 126 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm24379-201ENSMUST00000122695 86 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm26090-201ENSMUST00000157897 128 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm25976-201ENSMUST00000158695 130 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm26004-201ENSMUST00000158804 116 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm24638-201ENSMUST00000179807 132 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm27722-201ENSMUST00000183908 76 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.4□□□□□ -2.03
Col6a1Q04857 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Col6a1Q04857 Gm25112-201ENSMUST00000122680 104 ntBASIC2.39□□□□□ -2.03
Col6a1Q04857 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.39□□□□□ -2.03
Col6a1Q04857 Gm45471-201ENSMUST00000211270 281 ntBASIC2.39□□□□□ -2.03
Col6a1Q04857 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Col6a1Q04857 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.39□□□□□ -2.03
Col6a1Q04857 Gm11248-201ENSMUST00000119568 201 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm23601-201ENSMUST00000157259 131 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm22770-201ENSMUST00000158368 67 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm24333-201ENSMUST00000175101 84 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm43865-201ENSMUST00000204721 127 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm25796-201ENSMUST00000082645 163 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Mir423-201ENSMUST00000083584 109 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm26109-201ENSMUST00000083970 70 ntBASIC2.38□□□□□ -2.03
Col6a1Q04857 Gm24098-201ENSMUST00000102075 109 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm25381-201ENSMUST00000102078 109 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm22545-201ENSMUST00000104350 132 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm22706-201ENSMUST00000157907 112 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm22515-201ENSMUST00000158273 305 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm24769-201ENSMUST00000158506 129 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Gm23714-201ENSMUST00000179259 105 ntBASIC2.37□□□□□ -2.03
Col6a1Q04857 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Col6a1Q04857 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Gm25068-201ENSMUST00000103895 110 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Gm14882-201ENSMUST00000117216 218 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Gm23656-201ENSMUST00000122626 112 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Snord43-201ENSMUST00000199549 108 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Gm24661-201ENSMUST00000083205 104 ntBASIC2.36□□□□□ -2.03
Col6a1Q04857 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm11856-201ENSMUST00000118712 276 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm22083-201ENSMUST00000157586 102 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm22983-201ENSMUST00000158308 104 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm16561-201ENSMUST00000163001 192 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm44807-201ENSMUST00000206115 154 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.35□□□□□ -2.03
Col6a1Q04857 Gm24237-201ENSMUST00000157790 132 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Gm25241-201ENSMUST00000174909 84 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Gm26217-201ENSMUST00000175212 84 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Gm42795-201ENSMUST00000198847 76 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Gm26123-201ENSMUST00000083363 135 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Mir451a-201ENSMUST00000093557 72 ntBASIC2.34□□□□□ -2.03
Col6a1Q04857 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.34□□□□□ -2.04
Col6a1Q04857 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm22149-201ENSMUST00000104442 136 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm16328-201ENSMUST00000126985 196 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm25460-201ENSMUST00000157954 127 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm16550-201ENSMUST00000162550 126 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Mir3086-201ENSMUST00000175072 87 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm23369-201ENSMUST00000175406 105 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Gm27443-201ENSMUST00000184660 98 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Mir21c-201ENSMUST00000184910 78 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 Mir6901-201ENSMUST00000185062 62 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.33□□□□□ -2.04
Col6a1Q04857 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.32□□□□□ -2.04
Col6a1Q04857 Gm25611-201ENSMUST00000104017 133 ntBASIC2.32□□□□□ -2.04
Col6a1Q04857 Mir466l-201ENSMUST00000104866 121 ntBASIC2.32□□□□□ -2.04
Col6a1Q04857 Mir151-201ENSMUST00000083678 68 ntBASIC2.32□□□□□ -2.04
Col6a1Q04857 Mir301b-201ENSMUST00000102333 97 ntBASIC2.31□□□□□ -2.04
Col6a1Q04857 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.31□□□□□ -2.04
Col6a1Q04857 Gm23351-201ENSMUST00000158427 125 ntBASIC2.31□□□□□ -2.04
Col6a1Q04857 Gm20477-201ENSMUST00000174028 280 ntBASIC2.31□□□□□ -2.04
Col6a1Q04857 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.31□□□□□ -2.04
Col6a1Q04857 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Col6a1Q04857 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms