Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.1□□□□□ -2.07
Msx2Q03358 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Msx2Q03358 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Msx2Q03358 Gm22425-201ENSMUST00000158532 138 ntBASIC2.1□□□□□ -2.07
Msx2Q03358 Gm22500-201ENSMUST00000158982 99 ntBASIC2.1□□□□□ -2.07
Msx2Q03358 Gm20391-201ENSMUST00000174722 106 ntBASIC2.1□□□□□ -2.07
Msx2Q03358 Gm27365-201ENSMUST00000184041 177 ntBASIC2.1□□□□□ -2.07
Msx2Q03358 Gm26369-201ENSMUST00000157825 100 ntBASIC2.09□□□□□ -2.07
Msx2Q03358 Gm23917-201ENSMUST00000175256 98 ntBASIC2.09□□□□□ -2.07
Msx2Q03358 Gm24527-201ENSMUST00000082920 107 ntBASIC2.09□□□□□ -2.07
Msx2Q03358 Mir30c-2-201ENSMUST00000083633 84 ntBASIC2.09□□□□□ -2.07
Msx2Q03358 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm24122-201ENSMUST00000104107 132 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm24593-201ENSMUST00000122507 106 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm16328-201ENSMUST00000126985 196 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm22664-201ENSMUST00000158719 105 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm24880-201ENSMUST00000158776 85 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm23375-201ENSMUST00000175407 83 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Mir3076-201ENSMUST00000175415 60 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm27979-201ENSMUST00000185126 56 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Gm26441-201ENSMUST00000082590 104 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Mir151-201ENSMUST00000083678 68 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.08□□□□□ -2.08
Msx2Q03358 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Msx2Q03358 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm24900-201ENSMUST00000158128 134 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm25994-201ENSMUST00000175392 101 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Mir6237-201ENSMUST00000183808 91 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Mir497-201ENSMUST00000200557 84 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm20108-201ENSMUST00000219977 153 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm22884-201ENSMUST00000083127 140 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm24412-201ENSMUST00000083426 109 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Mir34c-201ENSMUST00000083653 77 ntBASIC2.07□□□□□ -2.08
Msx2Q03358 Gm23468-201ENSMUST00000157125 108 ntBASIC2.06□□□□□ -2.08
Msx2Q03358 Gm22093-201ENSMUST00000158980 111 ntBASIC2.06□□□□□ -2.08
Msx2Q03358 Mir8090-201ENSMUST00000185078 136 ntBASIC2.06□□□□□ -2.08
Msx2Q03358 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.06□□□□□ -2.08
Msx2Q03358 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.06□□□□□ -2.08
Msx2Q03358 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Msx2Q03358 Mir1949-201ENSMUST00000157434 141 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm24922-201ENSMUST00000158511 102 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm25044-201ENSMUST00000158603 104 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm24637-201ENSMUST00000158674 85 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm16550-201ENSMUST00000162550 126 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Mir7068-201ENSMUST00000183439 74 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm44462-201ENSMUST00000199696 129 ntBASIC2.05□□□□□ -2.08
Msx2Q03358 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.05□□□□□ -2.08
Msx2Q03358 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm22067-201ENSMUST00000122790 107 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm15654-201ENSMUST00000152660 300 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.04□□□□□ -2.08
Msx2Q03358 Gm25011-201ENSMUST00000158398 126 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm16539-201ENSMUST00000160086 327 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm27415-201ENSMUST00000183720 95 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Mir6419-201ENSMUST00000184784 113 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Mir7217-201ENSMUST00000200304 62 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.04□□□□□ -2.08
Msx2Q03358 Gm24907-201ENSMUST00000116932 128 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Gm22517-201ENSMUST00000158265 136 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Gm22605-201ENSMUST00000158289 108 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Mir1950-201ENSMUST00000158526 74 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Gm22666-201ENSMUST00000158717 164 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Gm23005-201ENSMUST00000158950 136 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Gm25949-201ENSMUST00000175333 114 ntBASIC2.03□□□□□ -2.08
Msx2Q03358 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Msx2Q03358 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Msx2Q03358 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Msx2Q03358 Gm26080-201ENSMUST00000104069 131 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Gm22677-201ENSMUST00000116977 108 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Gm25460-201ENSMUST00000157954 127 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Msx2Q03358 Gm43865-201ENSMUST00000204721 127 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Gm23299-201ENSMUST00000082708 79 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Mir107-201ENSMUST00000083660 87 ntBASIC2.02□□□□□ -2.09
Msx2Q03358 Mir1187-201ENSMUST00000116936 122 ntBASIC2.01□□□□□ -2.09
Msx2Q03358 Gm16307-201ENSMUST00000161269 210 ntBASIC2.01□□□□□ -2.09
Msx2Q03358 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.01□□□□□ -2.09
Msx2Q03358 Snord87-201ENSMUST00000175437 87 ntBASIC2.01□□□□□ -2.09
Msx2Q03358 Gm25229-201ENSMUST00000178587 79 ntBASIC2.01□□□□□ -2.09
Msx2Q03358 Mir6369-201ENSMUST00000183772 106 ntBASIC2.01□□□□□ -2.09
Msx2Q03358 Mir764-201ENSMUST00000103259 108 ntBASIC2□□□□□ -2.09
Msx2Q03358 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2□□□□□ -2.09
Msx2Q03358 Mir654-201ENSMUST00000104787 84 ntBASIC2□□□□□ -2.09
Msx2Q03358 Gm25113-201ENSMUST00000157185 143 ntBASIC2□□□□□ -2.09
Msx2Q03358 Gm3702-201ENSMUST00000211754 346 ntBASIC2□□□□□ -2.09
Msx2Q03358 mt-Tn-201ENSMUST00000082399 71 ntBASIC2□□□□□ -2.09
Msx2Q03358 Gm25899-201ENSMUST00000082672 141 ntBASIC2□□□□□ -2.09
Msx2Q03358 Mir221-201ENSMUST00000083488 95 ntBASIC2□□□□□ -2.09
Msx2Q03358 Gm24523-201ENSMUST00000083965 132 ntBASIC2□□□□□ -2.09
Msx2Q03358 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Msx2Q03358 Gm23803-201ENSMUST00000104610 132 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm25061-201ENSMUST00000104665 107 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Mir5118-201ENSMUST00000175551 67 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm26398-201ENSMUST00000179015 127 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm27722-201ENSMUST00000183908 76 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm23056-201ENSMUST00000082803 111 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm25696-201ENSMUST00000082900 105 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm25402-201ENSMUST00000082966 131 ntBASIC1.99□□□□□ -2.09
Msx2Q03358 Gm23344-201ENSMUST00000083818 68 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms