Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm25111-201ENSMUST00000116686 147 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm14883-201ENSMUST00000120179 157 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Mir1899-201ENSMUST00000122798 96 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm25885-201ENSMUST00000157779 109 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm22332-201ENSMUST00000158072 126 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm25015-201ENSMUST00000158400 128 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Mir669k-201ENSMUST00000177742 127 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm24488-201ENSMUST00000179934 127 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm25673-201ENSMUST00000179957 127 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm25701-201ENSMUST00000179988 127 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm26431-201ENSMUST00000180199 127 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm27672-201ENSMUST00000183751 204 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Mir6365-201ENSMUST00000183990 101 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Mir7229-201ENSMUST00000197062 53 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.12□□□□□ -2.39
Nkx3-1P97436 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm24460-201ENSMUST00000082731 106 ntBASIC0.12□□□□□ -2.39
Nkx3-1P97436 Gm22048-201ENSMUST00000104721 89 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm24833-201ENSMUST00000116775 120 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm12815-201ENSMUST00000121737 135 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm24250-201ENSMUST00000157320 135 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm23761-201ENSMUST00000158347 104 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Mir100-201ENSMUST00000175270 80 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm24575-201ENSMUST00000175502 77 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm23770-201ENSMUST00000178009 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm22832-201ENSMUST00000178022 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm23863-201ENSMUST00000178265 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm24828-201ENSMUST00000178507 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm23052-201ENSMUST00000178633 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm25729-201ENSMUST00000179050 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm25359-201ENSMUST00000179315 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm22624-201ENSMUST00000179913 108 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm19790-201ENSMUST00000214414 251 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm25588-201ENSMUST00000082501 140 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm24527-201ENSMUST00000082920 107 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm23679-201ENSMUST00000083161 119 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm25894-201ENSMUST00000083458 75 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm25895-201ENSMUST00000083714 100 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Gm10172-201ENSMUST00000085929 558 ntBASIC0.11□□□□□ -2.39
Nkx3-1P97436 Snord100-201ENSMUST00000116836 74 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm23987-201ENSMUST00000117039 129 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm14567-201ENSMUST00000117155 174 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm26160-201ENSMUST00000158965 63 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.1□□□□□ -2.39
Nkx3-1P97436 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm44455-201ENSMUST00000200061 82 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Gm25814-201ENSMUST00000082754 107 ntBASIC0.1□□□□□ -2.39
Nkx3-1P97436 Snord19-201ENSMUST00000104609 76 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Gm23841-201ENSMUST00000116951 114 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Gm14001-201ENSMUST00000118847 247 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Gm23003-201ENSMUST00000179948 107 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 AC159093.2-201ENSMUST00000227881 297 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Mir377-201ENSMUST00000083504 68 ntBASIC0.09□□□□□ -2.4
Nkx3-1P97436 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm22101-201ENSMUST00000157928 103 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Scarna8-201ENSMUST00000158333 131 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm23917-201ENSMUST00000175256 98 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir3108-201ENSMUST00000175500 79 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm23567-201ENSMUST00000178005 107 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm27476-201ENSMUST00000183366 104 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir7010-201ENSMUST00000183464 63 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir6342-201ENSMUST00000183870 125 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir6928-201ENSMUST00000185166 70 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm28767-201ENSMUST00000188601 114 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir3967-201ENSMUST00000198710 68 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm5002-201ENSMUST00000207145 223 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm8508-201ENSMUST00000061226 363 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm22358-201ENSMUST00000082877 122 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Mir411-201ENSMUST00000083543 82 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm25188-201ENSMUST00000083913 122 ntBASIC0.08□□□□□ -2.4
Nkx3-1P97436 Gm26420-201ENSMUST00000104273 103 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm23881-201ENSMUST00000116872 66 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm16186-201ENSMUST00000120132 216 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm23047-201ENSMUST00000177661 94 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm38364-201ENSMUST00000191814 179 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Mir721-201ENSMUST00000200230 88 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm3702-201ENSMUST00000211754 346 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Gm19572-201ENSMUST00000214326 338 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 Mir186-201ENSMUST00000083497 71 ntBASIC0.07□□□□□ -2.4
Nkx3-1P97436 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Nkx3-1P97436 Mir541-201ENSMUST00000102097 90 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm24276-201ENSMUST00000102181 110 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Mir466p-201ENSMUST00000103925 89 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm6897-201ENSMUST00000117714 138 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm14758-201ENSMUST00000119104 138 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm22145-201ENSMUST00000157396 148 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm23857-201ENSMUST00000158379 111 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm25952-201ENSMUST00000175329 74 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm25935-201ENSMUST00000178746 107 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Nkx3-1P97436 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.06□□□□□ -2.4
Nkx3-1P97436 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms