Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm26415-201ENSMUST00000157673 292 ntBASIC0.81□□□□□ -2.28
Col2a1P28481 Gm17020-201ENSMUST00000172274 274 ntBASIC0.81□□□□□ -2.28
Col2a1P28481 Gm37116-201ENSMUST00000195161 147 ntBASIC0.81□□□□□ -2.28
Col2a1P28481 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Col2a1P28481 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.81□□□□□ -2.28
Col2a1P28481 Mir186-201ENSMUST00000083497 71 ntBASIC0.81□□□□□ -2.28
Col2a1P28481 Mir880-201ENSMUST00000104809 78 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm22105-201ENSMUST00000116734 116 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm13345-201ENSMUST00000121928 228 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm24054-201ENSMUST00000158619 105 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm20386-201ENSMUST00000174010 132 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm26285-201ENSMUST00000177923 107 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm44322-201ENSMUST00000196830 115 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm20734-201ENSMUST00000216939 193 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm23622-201ENSMUST00000082460 107 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm24258-201ENSMUST00000083739 133 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Col2a1P28481 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm43749-201ENSMUST00000199345 352 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.8□□□□□ -2.28
Col2a1P28481 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Col2a1P28481 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm23080-201ENSMUST00000157846 103 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm23994-201ENSMUST00000158059 88 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm22088-201ENSMUST00000158341 117 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm22425-201ENSMUST00000158532 138 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Mir7675-201ENSMUST00000184262 58 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm18665-201ENSMUST00000189783 270 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm22576-201ENSMUST00000083733 104 ntBASIC0.79□□□□□ -2.28
Col2a1P28481 Gm26011-201ENSMUST00000104410 104 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 Gm24381-201ENSMUST00000122697 104 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 Gm23605-201ENSMUST00000157255 127 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 Gm45544-201ENSMUST00000211130 88 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 Mir141-201ENSMUST00000083540 72 ntBASIC0.78□□□□□ -2.28
Col2a1P28481 Gm22048-201ENSMUST00000104721 89 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Gm22079-201ENSMUST00000157592 106 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Gm16307-201ENSMUST00000161269 210 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Traj60-201ENSMUST00000167781 54 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Gm37545-201ENSMUST00000186512 148 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Gm28256-201ENSMUST00000188953 139 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Gm28559-201ENSMUST00000190532 139 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Snord1a-201ENSMUST00000083160 74 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Mir451a-201ENSMUST00000093557 72 ntBASIC0.77□□□□□ -2.29
Col2a1P28481 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Col2a1P28481 Gm44489-201ENSMUST00000104619 97 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm22842-201ENSMUST00000157709 118 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm24747-201ENSMUST00000157835 87 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm26090-201ENSMUST00000157897 128 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm23339-201ENSMUST00000158962 139 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Mir3061-201ENSMUST00000175129 91 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm26224-201ENSMUST00000082506 80 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Mir101a-201ENSMUST00000083517 83 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 Gm23947-201ENSMUST00000093636 107 ntBASIC0.76□□□□□ -2.29
Col2a1P28481 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm26076-201ENSMUST00000104065 105 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm22785-201ENSMUST00000104087 132 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Mir1197-201ENSMUST00000117037 120 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm14502-201ENSMUST00000118154 113 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm11644-201ENSMUST00000119735 150 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm22796-201ENSMUST00000157234 106 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm23996-201ENSMUST00000158062 131 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm23763-201ENSMUST00000158345 60 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm24880-201ENSMUST00000158776 85 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm23303-201ENSMUST00000082714 152 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Snord96a-201ENSMUST00000082791 81 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Mir201-201ENSMUST00000083470 66 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm24494-201ENSMUST00000083804 81 ntBASIC0.75□□□□□ -2.29
Col2a1P28481 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.75□□□□□ -2.29
Col2a1P28481 Gm26420-201ENSMUST00000104273 103 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm24232-201ENSMUST00000104314 132 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm26412-201ENSMUST00000157666 55 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Mir1966-201ENSMUST00000158807 108 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm22914-201ENSMUST00000175195 77 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm25949-201ENSMUST00000175333 114 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm27792-201ENSMUST00000184031 115 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.74□□□□□ -2.29
Col2a1P28481 Gm44396-201ENSMUST00000199843 114 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm44976-201ENSMUST00000205543 261 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm26123-201ENSMUST00000083363 135 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm10172-201ENSMUST00000085929 558 ntBASIC0.74□□□□□ -2.29
Col2a1P28481 Gm25980-201ENSMUST00000157176 218 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Gm22967-201ENSMUST00000157956 239 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Gm22332-201ENSMUST00000158072 126 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Gm27934-201ENSMUST00000158795 63 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Mir6377-201ENSMUST00000183760 114 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Col2a1P28481 Gm23445-201ENSMUST00000082800 107 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Col2a1P28481 Gm24250-201ENSMUST00000157320 135 ntBASIC0.73□□□□□ -2.29
Col2a1P28481 Gm25882-201ENSMUST00000157784 85 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms