Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Gm25769-201ENSMUST00000158569 127 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Mir7039-201ENSMUST00000183852 85 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Sdc1P18828 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.11□□□□□ -2.43
Sdc1P18828 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.11□□□□□ -2.43
Sdc1P18828 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.12□□□□□ -2.43
Sdc1P18828 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.12□□□□□ -2.43
Sdc1P18828 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Sdc1P18828 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.12□□□□□ -2.43
Sdc1P18828 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Gm25364-201ENSMUST00000158851 107 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Mir181a-2-201ENSMUST00000083489 76 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Mir382-201ENSMUST00000083494 76 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Mir384-201ENSMUST00000083565 88 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Mir146-201ENSMUST00000083667 65 ntBASIC-0.13□□□□□ -2.43
Sdc1P18828 Gm12686-201ENSMUST00000120546 397 ntBASIC-0.14□□□□□ -2.43
Sdc1P18828 Gm23581-201ENSMUST00000158531 63 ntBASIC-0.14□□□□□ -2.43
Sdc1P18828 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.14□□□□□ -2.43
Sdc1P18828 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.14□□□□□ -2.43
Sdc1P18828 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.14□□□□□ -2.43
Sdc1P18828 Gm26420-201ENSMUST00000104273 103 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.15□□□□□ -2.43
Sdc1P18828 Gm23451-201ENSMUST00000083328 122 ntBASIC-0.15□□□□□ -2.43
Sdc1P18828 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm22434-201ENSMUST00000158549 122 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm22358-201ENSMUST00000082877 122 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm25188-201ENSMUST00000083913 122 ntBASIC-0.16□□□□□ -2.44
Sdc1P18828 Gm26026-201ENSMUST00000122726 123 ntBASIC-0.17□□□□□ -2.44
Sdc1P18828 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.17□□□□□ -2.44
Sdc1P18828 Mir6905-201ENSMUST00000184228 70 ntBASIC-0.17□□□□□ -2.44
Sdc1P18828 Gm25895-201ENSMUST00000083714 100 ntBASIC-0.17□□□□□ -2.44
Sdc1P18828 Gm23345-201ENSMUST00000083817 150 ntBASIC-0.17□□□□□ -2.44
Sdc1P18828 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC-0.17□□□□□ -2.44
Sdc1P18828 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm22790-201ENSMUST00000157229 129 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm22088-201ENSMUST00000158341 117 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Mir8116-201ENSMUST00000184134 97 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm27845-201ENSMUST00000184479 114 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Snord85-201ENSMUST00000083262 73 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Mir186-201ENSMUST00000083497 71 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.18□□□□□ -2.44
Sdc1P18828 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Sdc1P18828 n-R5s87-201ENSMUST00000122752 116 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm23579-201ENSMUST00000158528 103 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm24761-201ENSMUST00000179589 127 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm24762-201ENSMUST00000083689 104 ntBASIC-0.19□□□□□ -2.44
Sdc1P18828 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.2□□□□□ -2.44
Sdc1P18828 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.2□□□□□ -2.44
Sdc1P18828 Gm12815-201ENSMUST00000121737 135 ntBASIC-0.2□□□□□ -2.44
Sdc1P18828 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Sdc1P18828 Mir18-201ENSMUST00000083469 96 ntBASIC-0.2□□□□□ -2.44
Sdc1P18828 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm12469-201ENSMUST00000117623 207 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm25720-201ENSMUST00000157503 105 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm25223-201ENSMUST00000158200 110 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm22433-201ENSMUST00000158550 142 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Trav5-2-201ENSMUST00000199855 280 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 AC192091.2-201ENSMUST00000217869 117 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.21□□□□□ -2.44
Sdc1P18828 Gm24276-201ENSMUST00000102181 110 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm25610-201ENSMUST00000104016 129 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.22□□□□□ -2.44
Sdc1P18828 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms