Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm14883-201ENSMUST00000120179 157 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm12686-201ENSMUST00000120546 397 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm28020-201ENSMUST00000157739 67 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm24728-201ENSMUST00000158226 125 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm22520-201ENSMUST00000158269 129 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Scarna8-201ENSMUST00000158333 131 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm25935-201ENSMUST00000178746 107 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm3702-201ENSMUST00000211754 346 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm19572-201ENSMUST00000214326 338 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.14□□□□□ -2.39
Cdx1P18111 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Snord95-201ENSMUST00000082846 68 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm26207-201ENSMUST00000082909 104 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm22576-201ENSMUST00000083733 104 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm25611-201ENSMUST00000104017 133 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm23987-201ENSMUST00000117039 129 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm12815-201ENSMUST00000121737 135 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm25444-201ENSMUST00000158999 113 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Cdx1P18111 Gm19790-201ENSMUST00000214414 251 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Cdx1P18111 Gm24460-201ENSMUST00000082731 106 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm24030-201ENSMUST00000083931 164 ntBASIC0.13□□□□□ -2.39
Cdx1P18111 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Cdx1P18111 Snord100-201ENSMUST00000116836 74 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm14567-201ENSMUST00000117155 174 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm22790-201ENSMUST00000157229 129 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm26160-201ENSMUST00000158965 63 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm22239-201ENSMUST00000175220 103 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.12□□□□□ -2.39
Cdx1P18111 Gm44457-201ENSMUST00000198109 76 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Gm42795-201ENSMUST00000198847 76 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.12□□□□□ -2.39
Cdx1P18111 Scarna9-201ENSMUST00000104318 70 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm24381-201ENSMUST00000122697 104 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm24250-201ENSMUST00000157320 135 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25015-201ENSMUST00000158400 128 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.11□□□□□ -2.39
Cdx1P18111 Mir100-201ENSMUST00000175270 80 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm23770-201ENSMUST00000178009 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm22832-201ENSMUST00000178022 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm23863-201ENSMUST00000178265 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm24828-201ENSMUST00000178507 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm23052-201ENSMUST00000178633 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25729-201ENSMUST00000179050 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25359-201ENSMUST00000179315 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm22624-201ENSMUST00000179913 108 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm24488-201ENSMUST00000179934 127 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25701-201ENSMUST00000179988 127 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm26431-201ENSMUST00000180199 127 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Mir6369-201ENSMUST00000183772 106 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm27905-201ENSMUST00000184005 207 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.11□□□□□ -2.39
Cdx1P18111 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.11□□□□□ -2.39
Cdx1P18111 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25588-201ENSMUST00000082501 140 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Gm25895-201ENSMUST00000083714 100 ntBASIC0.11□□□□□ -2.39
Cdx1P18111 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Cdx1P18111 Gm23841-201ENSMUST00000116951 114 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm6897-201ENSMUST00000117714 138 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm14758-201ENSMUST00000119104 138 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm22999-201ENSMUST00000157082 88 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm22101-201ENSMUST00000157928 103 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm25952-201ENSMUST00000175329 74 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm24575-201ENSMUST00000175502 77 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm23567-201ENSMUST00000178005 107 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Mir6904-201ENSMUST00000183443 67 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm38364-201ENSMUST00000191814 179 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Mir7229-201ENSMUST00000197062 53 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm44455-201ENSMUST00000200061 82 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm44989-201ENSMUST00000204749 217 ntBASIC0.1□□□□□ -2.39
Cdx1P18111 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Cdx1P18111 Mir541-201ENSMUST00000102097 90 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Snord19-201ENSMUST00000104609 76 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm14001-201ENSMUST00000118847 247 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm16186-201ENSMUST00000120132 216 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Mir1899-201ENSMUST00000122798 96 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm25267-201ENSMUST00000158522 63 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm25362-201ENSMUST00000158854 105 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm23047-201ENSMUST00000177661 94 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Gm23003-201ENSMUST00000179948 107 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 Mir7010-201ENSMUST00000183464 63 ntBASIC0.09□□□□□ -2.4
Cdx1P18111 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Cdx1P18111 Gm26420-201ENSMUST00000104273 103 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.08□□□□□ -2.4
Cdx1P18111 Gm26279-201ENSMUST00000157095 102 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm22145-201ENSMUST00000157396 148 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm22815-201ENSMUST00000157451 62 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm22332-201ENSMUST00000158072 126 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm24903-201ENSMUST00000158131 126 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm27476-201ENSMUST00000183366 104 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm28767-201ENSMUST00000188601 114 ntBASIC0.08□□□□□ -2.4
Cdx1P18111 Gm44345-201ENSMUST00000199560 135 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms