Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm25322-201ENSMUST00000122556 104 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Gm24937-201ENSMUST00000122597 134 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Gm23470-201ENSMUST00000157129 120 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Mir7013-201ENSMUST00000183540 72 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Gm20118-201ENSMUST00000187207 162 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.63□□□□□ -1.99
Msx1P13297 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.63□□□□□ -1.99
Msx1P13297 Gm25038-201ENSMUST00000082928 130 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Mir221-201ENSMUST00000083488 95 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Msx1P13297 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Msx1P13297 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Msx1P13297 Gm26277-201ENSMUST00000157097 152 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Gm24199-201ENSMUST00000157808 136 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Gm22099-201ENSMUST00000157925 123 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Gm24879-201ENSMUST00000158386 143 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Gm25014-201ENSMUST00000158401 103 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Snord93-201ENSMUST00000175580 71 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Mir7009-201ENSMUST00000184519 64 ntBASIC2.62□□□□□ -1.99
Msx1P13297 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
Msx1P13297 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Msx1P13297 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Msx1P13297 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.61□□□□□ -1.99
Msx1P13297 Gm25466-201ENSMUST00000103995 132 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm22227-201ENSMUST00000157356 259 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm22858-201ENSMUST00000174972 76 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm20718-201ENSMUST00000176058 259 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm20305-201ENSMUST00000193226 177 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Mir378a-201ENSMUST00000198300 66 ntBASIC2.61□□□□□ -1.99
Msx1P13297 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm24918-201ENSMUST00000083022 130 ntBASIC2.61□□□□□ -1.99
Msx1P13297 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Msx1P13297 Gm22048-201ENSMUST00000104721 89 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Mir654-201ENSMUST00000104787 84 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Gm24443-201ENSMUST00000157242 132 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Gm22554-201ENSMUST00000157798 147 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Gm24399-201ENSMUST00000157869 74 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Gm24575-201ENSMUST00000175502 77 ntBASIC2.6□□□□□ -1.99
Msx1P13297 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Msx1P13297 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Msx1P13297 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Msx1P13297 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.59□□□□□ -1.99
Msx1P13297 Gm25500-201ENSMUST00000104426 123 ntBASIC2.59□□□□□ -1.99
Msx1P13297 Gm27527-201ENSMUST00000183903 99 ntBASIC2.59□□□□□ -1.99
Msx1P13297 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.59□□□□□ -1.99
Msx1P13297 Gm25788-201ENSMUST00000082721 131 ntBASIC2.59□□□□□ -1.99
Msx1P13297 Gm23570-201ENSMUST00000083029 104 ntBASIC2.59□□□□□ -1.99
Msx1P13297 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Msx1P13297 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.59□□□□□ -2
Msx1P13297 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msx1P13297 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msx1P13297 Gm25529-201ENSMUST00000104850 92 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24274-201ENSMUST00000116787 124 ntBASIC2.58□□□□□ -2
Msx1P13297 DQ267100-201ENSMUST00000122600 72 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24509-201ENSMUST00000157086 101 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm25358-201ENSMUST00000157189 101 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24868-201ENSMUST00000157265 136 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm22330-201ENSMUST00000158068 115 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24077-201ENSMUST00000158183 136 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24223-201ENSMUST00000158827 90 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm25642-201ENSMUST00000175137 66 ntBASIC2.58□□□□□ -2
Msx1P13297 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.58□□□□□ -2
Msx1P13297 Gm24313-201ENSMUST00000082561 133 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm26494-201ENSMUST00000083154 143 ntBASIC2.58□□□□□ -2
Msx1P13297 Gm24493-201ENSMUST00000083805 143 ntBASIC2.58□□□□□ -2
Msx1P13297 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msx1P13297 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.58□□□□□ -2
Msx1P13297 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Msx1P13297 Gm25992-201ENSMUST00000102437 109 ntBASIC2.57□□□□□ -2
Msx1P13297 Gm24075-201ENSMUST00000158175 72 ntBASIC2.57□□□□□ -2
Msx1P13297 Gm3724-201ENSMUST00000197957 349 ntBASIC2.57□□□□□ -2
Msx1P13297 Gm44903-201ENSMUST00000206840 130 ntBASIC2.57□□□□□ -2
Msx1P13297 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.57□□□□□ -2
Msx1P13297 Gm25798-201ENSMUST00000082641 107 ntBASIC2.57□□□□□ -2
Msx1P13297 Gm26458-201ENSMUST00000082832 128 ntBASIC2.57□□□□□ -2
Msx1P13297 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Msx1P13297 Gm23785-201ENSMUST00000116741 96 ntBASIC2.56□□□□□ -2
Msx1P13297 Gm16561-201ENSMUST00000163001 192 ntBASIC2.56□□□□□ -2
Msx1P13297 Snora24-201ENSMUST00000174989 130 ntBASIC2.56□□□□□ -2
Msx1P13297 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
Msx1P13297 Gm24698-201ENSMUST00000083883 130 ntBASIC2.56□□□□□ -2
Msx1P13297 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Msx1P13297 Gm7209-201ENSMUST00000122339 333 ntBASIC2.55□□□□□ -2
Msx1P13297 Gm23900-201ENSMUST00000157569 108 ntBASIC2.55□□□□□ -2
Msx1P13297 Gm25838-201ENSMUST00000158920 120 ntBASIC2.55□□□□□ -2
Msx1P13297 Mir7242-201ENSMUST00000183710 79 ntBASIC2.55□□□□□ -2
Msx1P13297 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Msx1P13297 Mir682-201ENSMUST00000102281 96 ntBASIC2.54□□□□□ -2
Msx1P13297 Mir466k-201ENSMUST00000116774 122 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm14039-201ENSMUST00000118705 101 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm24291-201ENSMUST00000157633 162 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm22651-201ENSMUST00000157872 94 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm23409-201ENSMUST00000158516 237 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm24736-201ENSMUST00000158862 130 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm25160-201ENSMUST00000158914 102 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm24366-201ENSMUST00000175383 86 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm25820-202ENSMUST00000197479 128 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm43038-201ENSMUST00000202359 88 ntBASIC2.54□□□□□ -2
Msx1P13297 Gm45197-201ENSMUST00000205288 151 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 178.5 ms