Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.62□□□□□ -2.51
Col1a1P11087 Gm5002-201ENSMUST00000207145 223 ntBASIC-0.62□□□□□ -2.51
Col1a1P11087 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.62□□□□□ -2.51
Col1a1P11087 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.62□□□□□ -2.51
Col1a1P11087 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
Col1a1P11087 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.62□□□□□ -2.51
Col1a1P11087 Mir1191-201ENSMUST00000116883 120 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Snora26-201ENSMUST00000175614 121 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm27659-201ENSMUST00000183472 98 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Gm22578-201ENSMUST00000083730 107 ntBASIC-0.63□□□□□ -2.51
Col1a1P11087 Snord67-201ENSMUST00000104033 111 ntBASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm27935-201ENSMUST00000183894 79 ntBASIC-0.64□□□□□ -2.51
Col1a1P11087 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.64□□□□□ -2.51
Col1a1P11087 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
Col1a1P11087 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm38268-201ENSMUST00000195813 193 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.65□□□□□ -2.51
Col1a1P11087 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm22834-201ENSMUST00000102021 79 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm26255-201ENSMUST00000122492 103 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm22332-201ENSMUST00000158072 126 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.66□□□□□ -2.51
Col1a1P11087 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm26043-201ENSMUST00000116912 91 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm25109-201ENSMUST00000122474 114 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm28506-201ENSMUST00000189937 150 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm23613-201ENSMUST00000082596 87 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm23423-201ENSMUST00000082782 106 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm9227-201ENSMUST00000194733 566 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm44392-201ENSMUST00000196758 115 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Mir376a-201ENSMUST00000197584 68 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm24149-201ENSMUST00000082757 107 ntBASIC-0.67□□□□□ -2.52
Col1a1P11087 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.68□□□□□ -2.52
Col1a1P11087 Gm23536-201ENSMUST00000157541 134 ntBASIC-0.68□□□□□ -2.52
Col1a1P11087 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.68□□□□□ -2.52
Col1a1P11087 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.68□□□□□ -2.52
Col1a1P11087 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.68□□□□□ -2.52
Col1a1P11087 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.68□□□□□ -2.52
Col1a1P11087 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm22999-201ENSMUST00000157082 88 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm23515-201ENSMUST00000082829 107 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm26125-201ENSMUST00000083357 107 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.69□□□□□ -2.52
Col1a1P11087 Gm26293-201ENSMUST00000104170 84 ntBASIC-0.7□□□□□ -2.52
Col1a1P11087 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-0.7□□□□□ -2.52
Col1a1P11087 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.7□□□□□ -2.52
Col1a1P11087 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.7□□□□□ -2.52
Col1a1P11087 Gm24635-201ENSMUST00000122712 128 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms