Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22403-201ENSMUST00000174919 84 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm24366-201ENSMUST00000175383 86 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm44301-201ENSMUST00000200362 143 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm18213-201ENSMUST00000207850 178 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 mt-Ta-201ENSMUST00000082398 69 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm25081-201ENSMUST00000082534 108 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm25855-201ENSMUST00000082787 72 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm22704-201ENSMUST00000083027 137 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm24523-201ENSMUST00000083965 132 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Col5a1O88207 Mir1197-201ENSMUST00000117037 120 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm24000-201ENSMUST00000158063 89 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm22088-201ENSMUST00000158341 117 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm25771-201ENSMUST00000158565 144 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm25838-201ENSMUST00000158920 120 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm17528-201ENSMUST00000171026 239 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Mir6904-201ENSMUST00000183443 67 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Mir6419-201ENSMUST00000184784 113 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm37545-201ENSMUST00000186512 148 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm44325-201ENSMUST00000196757 77 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm44922-201ENSMUST00000206690 90 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm22283-201ENSMUST00000082556 161 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Snord1a-201ENSMUST00000083160 74 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Mir489-201ENSMUST00000093599 107 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm24588-201ENSMUST00000116696 83 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm11334-201ENSMUST00000121969 156 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm25241-201ENSMUST00000174909 84 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm26217-201ENSMUST00000175212 84 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm27974-201ENSMUST00000183415 105 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Mir7077-201ENSMUST00000183991 57 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm45544-201ENSMUST00000211130 88 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm25588-201ENSMUST00000082501 140 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.63□□□□□ -2.31
Col5a1O88207 Gm25980-201ENSMUST00000157176 218 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm22139-201ENSMUST00000158747 105 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm24229-201ENSMUST00000158830 118 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm22699-201ENSMUST00000175376 105 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm22286-201ENSMUST00000179708 107 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 AC124739.2-201ENSMUST00000222201 109 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm8508-201ENSMUST00000061226 363 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm25136-201ENSMUST00000083253 115 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm22576-201ENSMUST00000083733 104 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 Gm10813-201ENSMUST00000099936 90 ntBASIC0.62□□□□□ -2.31
Col5a1O88207 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Col5a1O88207 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col5a1O88207 Gm23578-201ENSMUST00000103943 104 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm25882-201ENSMUST00000157784 85 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm26073-201ENSMUST00000179906 127 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm23772-201ENSMUST00000104433 102 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Snord90-201ENSMUST00000104568 111 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm14567-201ENSMUST00000117155 174 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm24001-201ENSMUST00000158463 85 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Mir3061-201ENSMUST00000175129 91 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm22887-201ENSMUST00000178586 107 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Mir6350-201ENSMUST00000183639 105 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.61□□□□□ -2.31
Col5a1O88207 Mir224-201ENSMUST00000083608 82 ntBASIC0.61□□□□□ -2.31
Col5a1O88207 Mir669b-201ENSMUST00000102172 97 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm22790-201ENSMUST00000157229 129 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm22606-201ENSMUST00000158290 103 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm26403-201ENSMUST00000158500 105 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm16539-201ENSMUST00000160086 327 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm17020-201ENSMUST00000172274 274 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Mir7675-201ENSMUST00000184262 58 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Snord35a-201ENSMUST00000083884 90 ntBASIC0.6□□□□□ -2.31
Col5a1O88207 Gm24263-201ENSMUST00000104059 107 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm25915-201ENSMUST00000104265 126 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Col5a1O88207 Gm25011-201ENSMUST00000158398 126 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm22888-201ENSMUST00000158640 77 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm23020-201ENSMUST00000158766 253 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm27446-201ENSMUST00000183963 89 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm18502-201ENSMUST00000218679 199 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.59□□□□□ -2.31
Col5a1O88207 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Snora20-201ENSMUST00000082703 128 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Gm23722-201ENSMUST00000083002 130 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Mir201-201ENSMUST00000083470 66 ntBASIC0.59□□□□□ -2.31
Col5a1O88207 Mir653-201ENSMUST00000102402 85 ntBASIC0.59□□□□□ -2.32
Col5a1O88207 Gm22545-201ENSMUST00000104350 132 ntBASIC0.59□□□□□ -2.32
Col5a1O88207 Gm42855-201ENSMUST00000197388 253 ntBASIC0.59□□□□□ -2.32
Col5a1O88207 Gm24461-201ENSMUST00000082735 103 ntBASIC0.59□□□□□ -2.32
Col5a1O88207 Gm24616-201ENSMUST00000083274 139 ntBASIC0.59□□□□□ -2.32
Col5a1O88207 Gm24232-201ENSMUST00000104314 132 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm11792-201ENSMUST00000120640 168 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm23106-201ENSMUST00000157554 101 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm24808-201ENSMUST00000157993 118 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm23337-201ENSMUST00000158959 118 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm25071-201ENSMUST00000175232 70 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm26097-201ENSMUST00000179642 93 ntBASIC0.58□□□□□ -2.32
Col5a1O88207 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.58□□□□□ -2.32
Col5a1O88207 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms