Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm16539-201ENSMUST00000160086 327 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Mir3057-201ENSMUST00000175040 91 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm27959-201ENSMUST00000185172 111 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm44308-201ENSMUST00000197080 99 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm24524-201ENSMUST00000082925 170 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Mir654-201ENSMUST00000104787 84 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm25289-201ENSMUST00000122799 119 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm23601-201ENSMUST00000157259 131 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm25658-201ENSMUST00000158472 128 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm25044-201ENSMUST00000158603 104 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm23342-201ENSMUST00000158958 115 ntBASIC1.86□□□□□ -2.11
Pcdh1F7BJK1 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm13433-201ENSMUST00000121701 240 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm16328-201ENSMUST00000126985 196 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm23986-201ENSMUST00000157144 63 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm24237-201ENSMUST00000157790 132 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm25329-201ENSMUST00000158041 126 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm25011-201ENSMUST00000158398 126 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm25642-201ENSMUST00000175137 66 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Mir21c-201ENSMUST00000184910 78 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm44462-201ENSMUST00000199696 129 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Gm43977-201ENSMUST00000203970 189 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Pcdh1F7BJK1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Pcdh1F7BJK1 Gm24984-201ENSMUST00000104454 133 ntBASIC1.84□□□□□ -2.11
Pcdh1F7BJK1 Gm42935-201ENSMUST00000202004 151 ntBASIC1.84□□□□□ -2.11
Pcdh1F7BJK1 Gm22099-201ENSMUST00000157925 123 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Gm22727-201ENSMUST00000158090 116 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Gm23351-201ENSMUST00000158427 125 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Gm26379-202ENSMUST00000200225 132 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Mir497-201ENSMUST00000200557 84 ntBASIC1.83□□□□□ -2.12
Pcdh1F7BJK1 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Mir669d-201ENSMUST00000104644 121 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Gm24783-201ENSMUST00000157639 100 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Gm29535-201ENSMUST00000185723 109 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Gm28143-201ENSMUST00000191082 109 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.82□□□□□ -2.12
Pcdh1F7BJK1 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm23551-201ENSMUST00000116852 121 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm11248-201ENSMUST00000119568 201 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm25370-201ENSMUST00000158159 94 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm22159-201ENSMUST00000158412 130 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm7258-201ENSMUST00000179317 300 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm27399-201ENSMUST00000184250 78 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm25820-202ENSMUST00000197479 128 ntBASIC1.81□□□□□ -2.12
Pcdh1F7BJK1 Gm15536-201ENSMUST00000121411 114 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Gm16550-201ENSMUST00000162550 126 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Mir5104-201ENSMUST00000175319 94 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Pcdh1F7BJK1 Gm26051-201ENSMUST00000104642 93 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm15654-201ENSMUST00000152660 300 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm22729-201ENSMUST00000158088 129 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm22770-201ENSMUST00000158368 67 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm22200-201ENSMUST00000158614 67 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm25838-201ENSMUST00000158920 120 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Snora24-201ENSMUST00000174989 130 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm26466-201ENSMUST00000179615 79 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm28256-201ENSMUST00000188953 139 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm28559-201ENSMUST00000190532 139 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Gm23790-201ENSMUST00000083013 107 ntBASIC1.79□□□□□ -2.12
Pcdh1F7BJK1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Mir802-201ENSMUST00000103258 97 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Gm25730-201ENSMUST00000178753 165 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Mir6950-201ENSMUST00000184438 73 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Mir7009-201ENSMUST00000184519 64 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Gm44477-201ENSMUST00000199661 110 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Snord80-201ENSMUST00000083801 81 ntBASIC1.78□□□□□ -2.12
Pcdh1F7BJK1 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm25094-201ENSMUST00000103992 131 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm26077-201ENSMUST00000104064 123 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm23011-201ENSMUST00000104148 132 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm24478-201ENSMUST00000157439 158 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm22089-201ENSMUST00000158336 102 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm22403-201ENSMUST00000174919 84 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Snord50a-201ENSMUST00000178154 72 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm24463-201ENSMUST00000178417 72 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm21885-201ENSMUST00000178891 327 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Mir6905-201ENSMUST00000184228 70 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm27517-201ENSMUST00000184347 236 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm27544-201ENSMUST00000185069 155 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm43206-201ENSMUST00000197990 114 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Gm24151-201ENSMUST00000082758 141 ntBASIC1.77□□□□□ -2.13
Pcdh1F7BJK1 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm24098-201ENSMUST00000102075 109 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm25381-201ENSMUST00000102078 109 ntBASIC1.76□□□□□ -2.13
Pcdh1F7BJK1 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 188.9 ms