Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-1.72□□□□□ -2.69
ApobE9Q414 Gm23194-201ENSMUST00000158813 105 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Snord50b-201ENSMUST00000178497 72 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Gm23113-201ENSMUST00000158477 99 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Gm25870-201ENSMUST00000179845 79 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Gm42164-201ENSMUST00000198881 379 ntBASIC-1.72□□□□□ -2.69
ApobE9Q414 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-1.73□□□□□ -2.69
ApobE9Q414 Gm24202-201ENSMUST00000082948 103 ntBASIC-1.73□□□□□ -2.69
ApobE9Q414 Gm23845-201ENSMUST00000083834 152 ntBASIC-1.73□□□□□ -2.69
ApobE9Q414 Gm25056-201ENSMUST00000157372 62 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm17919-201ENSMUST00000173344 312 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Mir23a-201ENSMUST00000083677 75 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm25664-201ENSMUST00000157697 107 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm27385-201ENSMUST00000184747 104 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm28669-201ENSMUST00000188400 100 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm43884-201ENSMUST00000204251 559 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.74□□□□□ -2.69
ApobE9Q414 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm24492-201ENSMUST00000083798 107 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm26076-201ENSMUST00000104065 105 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm22842-201ENSMUST00000157709 118 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm26398-201ENSMUST00000179015 127 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm24595-201ENSMUST00000122501 110 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.75□□□□□ -2.69
ApobE9Q414 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.76□□□□□ -2.69
ApobE9Q414 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.76□□□□□ -2.69
ApobE9Q414 Mir379-201ENSMUST00000083564 66 ntBASIC-1.76□□□□□ -2.69
ApobE9Q414 Gm15175-201ENSMUST00000117629 132 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm25121-201ENSMUST00000179846 79 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm22248-201ENSMUST00000082482 150 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm25839-201ENSMUST00000158921 103 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm24818-201ENSMUST00000175093 161 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm24610-201ENSMUST00000083270 109 ntBASIC-1.77□□□□□ -2.69
ApobE9Q414 Gm23182-201ENSMUST00000158688 135 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm25361-201ENSMUST00000179358 76 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Mir485-201ENSMUST00000093620 73 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm25943-201ENSMUST00000103791 90 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Mir466o-201ENSMUST00000104832 84 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm25432-201ENSMUST00000158284 66 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm26271-201ENSMUST00000158349 104 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Mir297a-3-201ENSMUST00000103768 102 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm23013-201ENSMUST00000104146 106 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm18242-201ENSMUST00000218455 542 ntBASIC-1.78□□□□□ -2.69
ApobE9Q414 Gm24862-201ENSMUST00000179103 79 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm23310-201ENSMUST00000179105 79 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm25461-201ENSMUST00000179293 79 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-1.79□□□□□ -2.7
ApobE9Q414 AC164297.5-201ENSMUST00000224365 198 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm27926-201ENSMUST00000157180 66 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm26122-201ENSMUST00000083362 82 ntBASIC-1.79□□□□□ -2.7
ApobE9Q414 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm25008-201ENSMUST00000083809 81 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm22051-201ENSMUST00000117002 127 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm24238-201ENSMUST00000157792 98 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm23665-201ENSMUST00000158054 62 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Mir195b-201ENSMUST00000184814 97 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm15279-201ENSMUST00000155593 288 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Gm44554-201ENSMUST00000208738 147 ntBASIC-1.8□□□□□ -2.7
ApobE9Q414 Mir1951-201ENSMUST00000157981 89 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm24461-201ENSMUST00000082735 103 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm22259-201ENSMUST00000178926 107 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm23862-201ENSMUST00000180342 94 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm25204-201ENSMUST00000082843 106 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm23900-201ENSMUST00000157569 108 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm23557-201ENSMUST00000157820 138 ntBASIC-1.81□□□□□ -2.7
ApobE9Q414 Gm23000-201ENSMUST00000157083 139 ntBASIC-1.82□□□□□ -2.7
ApobE9Q414 Gm23422-201ENSMUST00000102000 107 ntBASIC-1.82□□□□□ -2.7
ApobE9Q414 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
ApobE9Q414 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-1.82□□□□□ -2.7
ApobE9Q414 Gm22290-201ENSMUST00000177655 107 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 AC121844.1-201ENSMUST00000218706 137 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Mir669h-201ENSMUST00000116944 125 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm23661-201ENSMUST00000122630 87 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm24084-201ENSMUST00000175173 137 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm22502-201ENSMUST00000082488 107 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm43749-201ENSMUST00000199345 352 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 AC155712.1-201ENSMUST00000219704 160 ntBASIC-1.83□□□□□ -2.7
ApobE9Q414 Gm24713-201ENSMUST00000178850 107 ntBASIC-1.84□□□□□ -2.7
ApobE9Q414 Gm25448-201ENSMUST00000180065 107 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms