Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm26076-201ENSMUST00000104065 105 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm25848-201ENSMUST00000116790 144 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm11388-201ENSMUST00000120908 159 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm23655-201ENSMUST00000122627 105 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm23020-201ENSMUST00000158766 253 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm6003-201ENSMUST00000187903 463 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm37715-201ENSMUST00000193206 235 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm23679-201ENSMUST00000083161 119 ntBASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
Lmx1aQ9JKU8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm13345-201ENSMUST00000121928 228 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm25882-201ENSMUST00000157784 85 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm25362-201ENSMUST00000158854 105 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm16307-201ENSMUST00000161269 210 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Mir6377-201ENSMUST00000183760 114 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm23451-201ENSMUST00000083328 122 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm26123-201ENSMUST00000083363 135 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Mir532-201ENSMUST00000093630 96 ntBASIC0.29□□□□□ -2.36
Lmx1aQ9JKU8 Gm26293-201ENSMUST00000104170 84 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Gm23838-201ENSMUST00000158067 162 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Gm24929-201ENSMUST00000083403 139 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Mir141-201ENSMUST00000083540 72 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.28□□□□□ -2.36
Lmx1aQ9JKU8 Gm25318-201ENSMUST00000122554 314 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm23763-201ENSMUST00000158345 60 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm27585-201ENSMUST00000183717 199 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm22358-201ENSMUST00000082877 122 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm25188-201ENSMUST00000083913 122 ntBASIC0.27□□□□□ -2.37
Lmx1aQ9JKU8 Gm24867-201ENSMUST00000104161 107 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm25267-201ENSMUST00000158522 63 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm38019-201ENSMUST00000195133 380 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Mir3970-201ENSMUST00000199287 90 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm19790-201ENSMUST00000214414 251 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.26□□□□□ -2.37
Lmx1aQ9JKU8 Gm25611-201ENSMUST00000104017 133 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm6952-201ENSMUST00000118629 159 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm14883-201ENSMUST00000120179 157 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm12815-201ENSMUST00000121737 135 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm27672-201ENSMUST00000183751 204 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Gm26326-201ENSMUST00000083070 129 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Mir146-201ENSMUST00000083667 65 ntBASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Lmx1aQ9JKU8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Mir3089-201ENSMUST00000175350 84 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Mir669k-201ENSMUST00000177742 127 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm25673-201ENSMUST00000179957 127 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm27402-201ENSMUST00000183890 120 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm45859-201ENSMUST00000212794 214 ntBASIC0.24□□□□□ -2.37
Lmx1aQ9JKU8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Gm25223-201ENSMUST00000158200 110 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Gm26160-201ENSMUST00000158965 63 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Gm24415-201ENSMUST00000180218 107 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Gm19572-201ENSMUST00000214326 338 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Mir384-201ENSMUST00000083565 88 ntBASIC0.23□□□□□ -2.37
Lmx1aQ9JKU8 Gm24793-201ENSMUST00000104289 132 ntBASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm22999-201ENSMUST00000157082 88 ntBASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm25771-201ENSMUST00000158565 144 ntBASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm38364-201ENSMUST00000191814 179 ntBASIC0.22□□□□□ -2.37
Lmx1aQ9JKU8 Gm24121-201ENSMUST00000102029 106 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Mir881-201ENSMUST00000104844 78 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm25494-201ENSMUST00000158143 100 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.21□□□□□ -2.38
Lmx1aQ9JKU8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms