Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm16328-201ENSMUST00000126985 196 ntBASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Gm26411-201ENSMUST00000157668 107 ntBASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Mir6419-201ENSMUST00000184784 113 ntBASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Gm44526-201ENSMUST00000204664 121 ntBASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim39Q9ESN2 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Gm22672-201ENSMUST00000104414 134 ntBASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Gm23369-201ENSMUST00000175406 105 ntBASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Mir93-201ENSMUST00000083593 88 ntBASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Gm24523-201ENSMUST00000083965 132 ntBASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trim39Q9ESN2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm26425-201ENSMUST00000122529 82 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm26369-201ENSMUST00000157825 100 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm25044-201ENSMUST00000158603 104 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm20718-201ENSMUST00000176058 259 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Mir5619-201ENSMUST00000176065 61 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm27979-201ENSMUST00000185126 56 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.31□□□□□ -2.04
Trim39Q9ESN2 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Gm26154-201ENSMUST00000102339 96 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Mir7232-201ENSMUST00000197929 74 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Snord43-201ENSMUST00000199549 108 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Gm45452-201ENSMUST00000210905 177 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.3□□□□□ -2.04
Trim39Q9ESN2 Mir764-201ENSMUST00000103259 108 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Gm26247-201ENSMUST00000116702 91 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Gm15654-201ENSMUST00000152660 300 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Gm25153-201ENSMUST00000157118 156 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Gm25382-201ENSMUST00000157811 97 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Mir300-201ENSMUST00000083485 79 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Mir221-201ENSMUST00000083488 95 ntBASIC2.29□□□□□ -2.04
Trim39Q9ESN2 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trim39Q9ESN2 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm22089-201ENSMUST00000158336 102 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm25949-201ENSMUST00000175333 114 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm24801-201ENSMUST00000178503 105 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim39Q9ESN2 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm24203-201ENSMUST00000082949 114 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Gm24698-201ENSMUST00000083883 130 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.28□□□□□ -2.04
Trim39Q9ESN2 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Trim39Q9ESN2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Mir682-201ENSMUST00000102281 96 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Mir466k-201ENSMUST00000116774 122 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Gm25066-201ENSMUST00000158145 123 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Gm24366-201ENSMUST00000175383 86 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Gm23860-201ENSMUST00000179446 132 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Mir151-201ENSMUST00000083678 68 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.27□□□□□ -2.05
Trim39Q9ESN2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm24670-201ENSMUST00000104154 132 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm22674-201ENSMUST00000104413 131 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm24691-201ENSMUST00000157762 140 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm16539-201ENSMUST00000160086 327 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Mir7013-201ENSMUST00000183540 72 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim39Q9ESN2 Gm23208-201ENSMUST00000158666 127 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Gm23917-201ENSMUST00000175256 98 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Mir6237-201ENSMUST00000183808 91 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Gm24527-201ENSMUST00000082920 107 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Gm24412-201ENSMUST00000083426 109 ntBASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim39Q9ESN2 Gm23600-201ENSMUST00000157260 71 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Mir1949-201ENSMUST00000157434 141 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Gm25994-201ENSMUST00000175392 101 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Mir6993-201ENSMUST00000184912 65 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Mir30f-201ENSMUST00000196073 92 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Gm22622-201ENSMUST00000082870 129 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trim39Q9ESN2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm25407-201ENSMUST00000104102 134 ntBASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim39Q9ESN2 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 340.2 ms