Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm24246-201ENSMUST00000157315 132 ntBASIC1.91□□□□□ -2.1
Ushbp1Q8R370 Gm22079-201ENSMUST00000157592 106 ntBASIC1.91□□□□□ -2.1
Ushbp1Q8R370 Gm25423-201ENSMUST00000157609 107 ntBASIC1.91□□□□□ -2.1
Ushbp1Q8R370 Gm25279-201ENSMUST00000122608 133 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Gm22796-201ENSMUST00000157234 106 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Gm25769-201ENSMUST00000158569 127 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Gm25750-201ENSMUST00000175483 112 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Mir6240-201ENSMUST00000184281 117 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Gm44384-201ENSMUST00000200208 114 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Snora20-201ENSMUST00000082703 128 ntBASIC1.9□□□□□ -2.11
Ushbp1Q8R370 Gm23253-201ENSMUST00000157441 104 ntBASIC1.89□□□□□ -2.11
Ushbp1Q8R370 Gm27894-201ENSMUST00000184177 92 ntBASIC1.89□□□□□ -2.11
Ushbp1Q8R370 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.89□□□□□ -2.11
Ushbp1Q8R370 Gm45471-201ENSMUST00000211270 281 ntBASIC1.89□□□□□ -2.11
Ushbp1Q8R370 Mir148b-201ENSMUST00000083626 97 ntBASIC1.89□□□□□ -2.11
Ushbp1Q8R370 Mir880-201ENSMUST00000104809 78 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Gm24718-201ENSMUST00000157521 136 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Gm24229-201ENSMUST00000158830 118 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Gm25831-201ENSMUST00000158924 163 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Mir7665-201ENSMUST00000184907 63 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ushbp1Q8R370 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm14946-201ENSMUST00000119859 296 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm24250-201ENSMUST00000157320 135 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm24902-201ENSMUST00000158126 123 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm23770-201ENSMUST00000178009 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm22832-201ENSMUST00000178022 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm23863-201ENSMUST00000178265 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm24828-201ENSMUST00000178507 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm23052-201ENSMUST00000178633 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm25729-201ENSMUST00000179050 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm25359-201ENSMUST00000179315 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm22624-201ENSMUST00000179913 108 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Gm8508-201ENSMUST00000061226 363 ntBASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ushbp1Q8R370 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Gm12432-201ENSMUST00000119540 186 ntBASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Gm25623-201ENSMUST00000157216 108 ntBASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Gm24916-201ENSMUST00000157287 79 ntBASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Mir6928-201ENSMUST00000185166 70 ntBASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ushbp1Q8R370 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm24482-201ENSMUST00000117005 93 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm14882-201ENSMUST00000117216 218 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm22082-201ENSMUST00000157587 161 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm24842-201ENSMUST00000158681 54 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm25976-201ENSMUST00000158695 130 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm22665-201ENSMUST00000158720 275 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm20391-201ENSMUST00000174722 106 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm42855-201ENSMUST00000197388 253 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Gm23140-201ENSMUST00000082487 107 ntBASIC1.85□□□□□ -2.11
Ushbp1Q8R370 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm15289-201ENSMUST00000117793 244 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm22386-201ENSMUST00000158192 129 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm26213-201ENSMUST00000158582 110 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm24926-201ENSMUST00000178053 79 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm22632-201ENSMUST00000178266 79 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Mir669j-201ENSMUST00000179023 121 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm18433-201ENSMUST00000192747 197 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm37796-201ENSMUST00000195327 134 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm44481-201ENSMUST00000197288 84 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm44339-201ENSMUST00000200598 84 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Gm24165-201ENSMUST00000082718 128 ntBASIC1.84□□□□□ -2.11
Ushbp1Q8R370 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ushbp1Q8R370 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Ushbp1Q8R370 Gm23434-201ENSMUST00000157179 100 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Mir3094-201ENSMUST00000175121 64 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Gm25815-201ENSMUST00000082755 107 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Gm25038-201ENSMUST00000082928 130 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Gm22884-201ENSMUST00000083127 140 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Gm24523-201ENSMUST00000083965 132 ntBASIC1.83□□□□□ -2.12
Ushbp1Q8R370 Gm24342-201ENSMUST00000103907 104 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm26076-201ENSMUST00000104065 105 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm26090-201ENSMUST00000157897 128 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm23996-201ENSMUST00000158062 131 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm25367-201ENSMUST00000158846 106 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm27248-201ENSMUST00000184004 166 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Mir6962-201ENSMUST00000199512 63 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm26456-201ENSMUST00000082831 111 ntBASIC1.82□□□□□ -2.12
Ushbp1Q8R370 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Snord64-201ENSMUST00000104003 67 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm11792-201ENSMUST00000120640 168 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm26181-201ENSMUST00000157687 106 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm22332-201ENSMUST00000158072 126 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm22708-201ENSMUST00000158987 103 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm27446-201ENSMUST00000183963 89 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Mir7241-201ENSMUST00000184532 64 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm28383-201ENSMUST00000187563 139 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm26168-201ENSMUST00000083787 112 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Gm24030-201ENSMUST00000083931 164 ntBASIC1.81□□□□□ -2.12
Ushbp1Q8R370 Mir451a-201ENSMUST00000093557 72 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 209.5 ms