Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm22338-201ENSMUST00000157715 129 ntBASIC2.91□□□□□ -1.94
Trim47Q8C0E3 Gm22768-201ENSMUST00000158366 153 ntBASIC2.91□□□□□ -1.94
Trim47Q8C0E3 Gm25470-201ENSMUST00000175576 111 ntBASIC2.91□□□□□ -1.94
Trim47Q8C0E3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trim47Q8C0E3 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Gm23854-201ENSMUST00000158378 108 ntBASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Gm27330-201ENSMUST00000184689 132 ntBASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Mir490-201ENSMUST00000093567 84 ntBASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Gm24162-201ENSMUST00000093665 102 ntBASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trim47Q8C0E3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Gm24656-201ENSMUST00000177548 132 ntBASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Gm37807-201ENSMUST00000194310 190 ntBASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Mir3961-201ENSMUST00000198795 59 ntBASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Gm23344-201ENSMUST00000083818 68 ntBASIC2.89□□□□□ -1.95
Trim47Q8C0E3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm26342-201ENSMUST00000104557 129 ntBASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm22888-201ENSMUST00000158640 77 ntBASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm7258-201ENSMUST00000179317 300 ntBASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Gm27878-201ENSMUST00000184000 106 ntBASIC2.88□□□□□ -1.95
Trim47Q8C0E3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm16171-201ENSMUST00000118004 324 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm22666-201ENSMUST00000158717 164 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm16550-201ENSMUST00000162550 126 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm28900-201ENSMUST00000185232 156 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm26379-202ENSMUST00000200225 132 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm19118-201ENSMUST00000222554 98 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm23299-201ENSMUST00000082708 79 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm26123-201ENSMUST00000083363 135 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm22743-201ENSMUST00000083445 133 ntBASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim47Q8C0E3 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm23528-201ENSMUST00000104571 132 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Mir880-201ENSMUST00000104809 78 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm24396-201ENSMUST00000116905 93 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm24183-201ENSMUST00000122572 93 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm24384-201ENSMUST00000122693 75 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Mir6386-201ENSMUST00000183558 104 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Mir8103-201ENSMUST00000183945 107 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Gm23249-201ENSMUST00000083369 161 ntBASIC2.86□□□□□ -1.95
Trim47Q8C0E3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Mir682-201ENSMUST00000102281 96 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm25611-201ENSMUST00000104017 133 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm11966-201ENSMUST00000119907 87 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm26485-201ENSMUST00000158019 64 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm25618-201ENSMUST00000179484 107 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Mir7013-201ENSMUST00000183540 72 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm25357-201ENSMUST00000082745 72 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Mir451a-201ENSMUST00000093557 72 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.85□□□□□ -1.95
Trim47Q8C0E3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.84□□□□□ -1.95
Trim47Q8C0E3 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm24880-201ENSMUST00000158776 85 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm25642-201ENSMUST00000175137 66 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm44462-201ENSMUST00000199696 129 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm23570-201ENSMUST00000083029 104 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.84□□□□□ -1.95
Trim47Q8C0E3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trim47Q8C0E3 Gm26004-201ENSMUST00000158804 116 ntBASIC2.83□□□□□ -1.96
Trim47Q8C0E3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.83□□□□□ -1.96
Trim47Q8C0E3 Mir378a-201ENSMUST00000198300 66 ntBASIC2.83□□□□□ -1.96
Trim47Q8C0E3 Gm22622-201ENSMUST00000082870 129 ntBASIC2.83□□□□□ -1.96
Trim47Q8C0E3 Gm24412-201ENSMUST00000083426 109 ntBASIC2.83□□□□□ -1.96
Trim47Q8C0E3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Gm22227-201ENSMUST00000157356 259 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Gm24199-201ENSMUST00000157808 136 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Gm22732-201ENSMUST00000158093 121 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.82□□□□□ -1.96
Trim47Q8C0E3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Trim47Q8C0E3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm22151-201ENSMUST00000116963 58 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm12941-201ENSMUST00000117934 220 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm25322-201ENSMUST00000122556 104 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm24868-201ENSMUST00000157265 136 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm24077-201ENSMUST00000158183 136 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm22425-201ENSMUST00000158532 138 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm23370-201ENSMUST00000199545 130 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm26494-201ENSMUST00000083154 143 ntBASIC2.81□□□□□ -1.96
Trim47Q8C0E3 Gm26062-201ENSMUST00000083379 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 161.9 ms