Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm11856-201ENSMUST00000118712 276 ntBASIC2.45□□□□□ -2.02
Prpf40bQ80W14 Gm22332-201ENSMUST00000158072 126 ntBASIC2.45□□□□□ -2.02
Prpf40bQ80W14 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Prpf40bQ80W14 Mir93-201ENSMUST00000083593 88 ntBASIC2.45□□□□□ -2.02
Prpf40bQ80W14 Mir151-201ENSMUST00000083678 68 ntBASIC2.45□□□□□ -2.02
Prpf40bQ80W14 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Prpf40bQ80W14 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.44□□□□□ -2.02
Prpf40bQ80W14 Gm24076-201ENSMUST00000158179 94 ntBASIC2.44□□□□□ -2.02
Prpf40bQ80W14 Gm25069-201ENSMUST00000175238 86 ntBASIC2.44□□□□□ -2.02
Prpf40bQ80W14 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Prpf40bQ80W14 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.44□□□□□ -2.02
Prpf40bQ80W14 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.44□□□□□ -2.02
Prpf40bQ80W14 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm25068-201ENSMUST00000103895 110 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm26076-201ENSMUST00000104065 105 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm24238-201ENSMUST00000157792 98 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm24900-201ENSMUST00000158128 134 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm45268-201ENSMUST00000210046 370 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm26922-201ENSMUST00000082687 72 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.43□□□□□ -2.02
Prpf40bQ80W14 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Gm11792-201ENSMUST00000120640 168 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Mir1949-201ENSMUST00000157434 141 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Gm20409-201ENSMUST00000173457 130 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Gm26498-201ENSMUST00000177799 79 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Gm26230-201ENSMUST00000180141 79 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Mir411-201ENSMUST00000083543 82 ntBASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Prpf40bQ80W14 Mir301b-201ENSMUST00000102333 97 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 Gm23654-201ENSMUST00000116758 126 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 Gm26090-201ENSMUST00000157897 128 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 Gm25994-201ENSMUST00000175392 101 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.41□□□□□ -2.02
Prpf40bQ80W14 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Prpf40bQ80W14 Gm24913-201ENSMUST00000157286 107 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 Gm23996-201ENSMUST00000158062 131 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 Gm24877-201ENSMUST00000158779 116 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 Gm45429-201ENSMUST00000209527 172 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 Gm45471-201ENSMUST00000211270 281 ntBASIC2.4□□□□□ -2.03
Prpf40bQ80W14 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Gm25978-201ENSMUST00000158698 90 ntBASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Gm25750-201ENSMUST00000175483 112 ntBASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Snora69-201ENSMUST00000083708 131 ntBASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Prpf40bQ80W14 Gm24098-201ENSMUST00000102075 109 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gm25381-201ENSMUST00000102078 109 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gm23083-201ENSMUST00000157851 116 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gm22093-201ENSMUST00000158980 111 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gm24572-201ENSMUST00000175505 88 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gm23267-201ENSMUST00000178490 132 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Mir6419-201ENSMUST00000184784 113 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Mir451a-201ENSMUST00000093557 72 ntBASIC2.38□□□□□ -2.03
Prpf40bQ80W14 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Gm25544-201ENSMUST00000122676 120 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Gm24237-201ENSMUST00000157790 132 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Gm26213-201ENSMUST00000158582 110 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.37□□□□□ -2.03
Prpf40bQ80W14 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Gm24412-201ENSMUST00000083426 109 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Mir107-201ENSMUST00000083660 87 ntBASIC2.37□□□□□ -2.03
Prpf40bQ80W14 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Prpf40bQ80W14 Gm25460-201ENSMUST00000157954 127 ntBASIC2.36□□□□□ -2.03
Prpf40bQ80W14 Mir7683-201ENSMUST00000183842 61 ntBASIC2.36□□□□□ -2.03
Prpf40bQ80W14 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.36□□□□□ -2.03
Prpf40bQ80W14 Gm14588-201ENSMUST00000119895 172 ntBASIC2.35□□□□□ -2.03
Prpf40bQ80W14 Snord87-201ENSMUST00000175437 87 ntBASIC2.35□□□□□ -2.03
Prpf40bQ80W14 Gm27443-201ENSMUST00000184660 98 ntBASIC2.35□□□□□ -2.03
Prpf40bQ80W14 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.35□□□□□ -2.03
Prpf40bQ80W14 Gm22884-201ENSMUST00000083127 140 ntBASIC2.35□□□□□ -2.03
Prpf40bQ80W14 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
Prpf40bQ80W14 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Gm22031-201ENSMUST00000116945 126 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Gm25368-201ENSMUST00000158847 131 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Mir6352-201ENSMUST00000184495 116 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Gm28270-201ENSMUST00000188550 109 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Gm28328-201ENSMUST00000188869 109 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.34□□□□□ -2.03
Prpf40bQ80W14 Mir450b-201ENSMUST00000102095 82 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Gm26154-201ENSMUST00000102339 96 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Gm25832-201ENSMUST00000104140 130 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Gm23208-201ENSMUST00000158666 127 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Gm24366-201ENSMUST00000175383 86 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Gm22638-201ENSMUST00000179674 107 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.33□□□□□ -2.04
Prpf40bQ80W14 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Gm25090-201ENSMUST00000104000 132 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Gm22815-201ENSMUST00000157451 62 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Gm22554-201ENSMUST00000157798 147 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Mir7217-201ENSMUST00000200304 62 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Gm24523-201ENSMUST00000083965 132 ntBASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Prpf40bQ80W14 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 172.5 ms