Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Gm25851-201ENSMUST00000082794 107 ntBASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Gm12309-201ENSMUST00000119889 182 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 Gm23181-201ENSMUST00000158685 110 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 Gm24668-201ENSMUST00000158935 104 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 Gm26073-201ENSMUST00000179906 127 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.05□□□□□ -2.08
Shkbp1Q6P7W2 Gm14674-201ENSMUST00000117816 342 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Gm24947-201ENSMUST00000158334 110 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Mir7679-201ENSMUST00000183379 63 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Gm43206-201ENSMUST00000197990 114 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Gm22743-201ENSMUST00000083445 133 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Gm24261-201ENSMUST00000083744 104 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Gm22723-201ENSMUST00000083820 129 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Mir490-201ENSMUST00000093567 84 ntBASIC2.04□□□□□ -2.08
Shkbp1Q6P7W2 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm22033-201ENSMUST00000116947 90 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm26253-201ENSMUST00000122493 103 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm24000-201ENSMUST00000158063 89 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm22768-201ENSMUST00000158366 153 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm27979-201ENSMUST00000185126 56 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm23370-201ENSMUST00000199545 130 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm26379-202ENSMUST00000200225 132 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm45268-201ENSMUST00000210046 370 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm26922-201ENSMUST00000082687 72 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gm24099-201ENSMUST00000083384 107 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Mir429-201ENSMUST00000083493 83 ntBASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Shkbp1Q6P7W2 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
Shkbp1Q6P7W2 Gm25090-201ENSMUST00000104000 132 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Gm14947-201ENSMUST00000133704 303 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Mir6352-201ENSMUST00000184495 116 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Gm29535-201ENSMUST00000185723 109 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Gm28143-201ENSMUST00000191082 109 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Gm25855-201ENSMUST00000082787 72 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Mir411-201ENSMUST00000083543 82 ntBASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.02□□□□□ -2.09
Shkbp1Q6P7W2 Gm25289-201ENSMUST00000122799 119 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm24238-201ENSMUST00000157792 98 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm23083-201ENSMUST00000157851 116 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm22888-201ENSMUST00000158640 77 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm23289-201ENSMUST00000175615 108 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Snord50a-201ENSMUST00000178154 72 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm24463-201ENSMUST00000178417 72 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Gm6109-201ENSMUST00000223297 348 ntBASIC2.01□□□□□ -2.09
Shkbp1Q6P7W2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2□□□□□ -2.09
Shkbp1Q6P7W2 n-R5s188-201ENSMUST00000122646 105 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Gm25113-201ENSMUST00000157185 143 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Gm24333-201ENSMUST00000175101 84 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Gm26466-201ENSMUST00000179615 79 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 AC129202.1-201ENSMUST00000224895 526 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 AC126691.1-201ENSMUST00000226534 202 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Snora20-201ENSMUST00000082703 128 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Gm23377-201ENSMUST00000082943 126 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 n-R5s197-201ENSMUST00000083302 119 ntBASIC2□□□□□ -2.09
Shkbp1Q6P7W2 Gm26004-201ENSMUST00000158804 116 ntBASIC1.99□□□□□ -2.09
Shkbp1Q6P7W2 Mir7678-201ENSMUST00000185076 71 ntBASIC1.99□□□□□ -2.09
Shkbp1Q6P7W2 Gm44408-201ENSMUST00000200205 66 ntBASIC1.99□□□□□ -2.09
Shkbp1Q6P7W2 Gm7214-201ENSMUST00000222428 272 ntBASIC1.99□□□□□ -2.09
Shkbp1Q6P7W2 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Gm26154-201ENSMUST00000102339 96 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Gm25887-201ENSMUST00000157777 84 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Gm24851-201ENSMUST00000158028 103 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Gm24656-201ENSMUST00000177548 132 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Mir6388-201ENSMUST00000184417 75 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Mir7217-201ENSMUST00000200304 62 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Shkbp1Q6P7W2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm24049-201ENSMUST00000102409 100 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm22545-201ENSMUST00000104350 132 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm22151-201ENSMUST00000116963 58 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm22729-201ENSMUST00000158088 129 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm22943-201ENSMUST00000158564 76 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm25996-201ENSMUST00000175393 117 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Mir30d-201ENSMUST00000083503 82 ntBASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Shkbp1Q6P7W2 Mir880-201ENSMUST00000104809 78 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm22999-201ENSMUST00000157082 88 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm24649-201ENSMUST00000157106 134 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.96□□□□□ -2.1
Shkbp1Q6P7W2 Gm27898-201ENSMUST00000183987 80 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 137.7 ms