Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm23237-201ENSMUST00000104639 92 ntBASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Mir21c-201ENSMUST00000184910 78 ntBASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Gm42795-201ENSMUST00000198847 76 ntBASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Mir7215-201ENSMUST00000200383 51 ntBASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Mir127-201ENSMUST00000093568 70 ntBASIC2.44□□□□□ -2.02
Sh3rf1Q69ZI1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Gm25329-201ENSMUST00000158041 126 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Gm24210-201ENSMUST00000158263 133 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Gm27415-201ENSMUST00000183720 95 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Trbv25-201ENSMUST00000194700 273 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Mir378a-201ENSMUST00000198300 66 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Gm25337-201ENSMUST00000083723 104 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Mir490-201ENSMUST00000093567 84 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.43□□□□□ -2.02
Sh3rf1Q69ZI1 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm23889-201ENSMUST00000122689 104 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm22503-201ENSMUST00000158983 115 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm24801-201ENSMUST00000178503 105 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm27369-201ENSMUST00000185182 71 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm45471-201ENSMUST00000211270 281 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm24698-201ENSMUST00000083883 130 ntBASIC2.42□□□□□ -2.02
Sh3rf1Q69ZI1 Gm23803-201ENSMUST00000104610 132 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm22227-201ENSMUST00000157356 259 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm23065-201ENSMUST00000158236 130 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Mir1950-201ENSMUST00000158526 74 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm23917-201ENSMUST00000175256 98 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm7258-201ENSMUST00000179317 300 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Gm23056-201ENSMUST00000082803 111 ntBASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Sh3rf1Q69ZI1 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.4□□□□□ -2.03
Sh3rf1Q69ZI1 Gm25866-201ENSMUST00000158245 112 ntBASIC2.4□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24656-201ENSMUST00000177548 132 ntBASIC2.4□□□□□ -2.03
Sh3rf1Q69ZI1 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.4□□□□□ -2.03
Sh3rf1Q69ZI1 Gm26441-201ENSMUST00000082590 104 ntBASIC2.4□□□□□ -2.03
Sh3rf1Q69ZI1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Mir1187-201ENSMUST00000116936 122 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm11248-201ENSMUST00000119568 201 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm23468-201ENSMUST00000157125 108 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24771-201ENSMUST00000158508 137 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22888-201ENSMUST00000158640 77 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24637-201ENSMUST00000158674 85 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Mir7009-201ENSMUST00000184519 64 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Mir7232-201ENSMUST00000197929 74 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm23370-201ENSMUST00000199545 130 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm25796-201ENSMUST00000082645 163 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22743-201ENSMUST00000083445 133 ntBASIC2.39□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22752-201ENSMUST00000102083 109 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm26090-201ENSMUST00000157897 128 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm26004-201ENSMUST00000158804 116 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24668-201ENSMUST00000158935 104 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm44807-201ENSMUST00000206115 154 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24313-201ENSMUST00000082561 133 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Mir429-201ENSMUST00000083493 83 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Sh3rf1Q69ZI1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm23551-201ENSMUST00000116852 121 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm26280-201ENSMUST00000157096 101 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm24674-201ENSMUST00000179194 104 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm27399-201ENSMUST00000184250 78 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Gm27959-201ENSMUST00000185172 111 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.37□□□□□ -2.03
Sh3rf1Q69ZI1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 Mir669d-201ENSMUST00000104644 121 ntBASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22605-201ENSMUST00000158289 108 ntBASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 Gm20108-201ENSMUST00000219977 153 ntBASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Sh3rf1Q69ZI1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Gm25061-201ENSMUST00000104665 107 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Mir880-201ENSMUST00000104809 78 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Gm15536-201ENSMUST00000121411 114 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22089-201ENSMUST00000158336 102 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Mir6237-201ENSMUST00000183808 91 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Gm23293-201ENSMUST00000082552 104 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Mir451a-201ENSMUST00000093557 72 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.35□□□□□ -2.03
Sh3rf1Q69ZI1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Gm23011-201ENSMUST00000104148 132 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Gm22815-201ENSMUST00000157451 62 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Gm26369-201ENSMUST00000157825 100 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Gm42935-201ENSMUST00000202004 151 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.34□□□□□ -2.03
Sh3rf1Q69ZI1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms