Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm25673-201ENSMUST00000179957 127 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm25701-201ENSMUST00000179988 127 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm26431-201ENSMUST00000180199 127 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Snord60-201ENSMUST00000082834 78 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.55□□□□□ -2.5
Trav2Q5R1I9 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm14307-201ENSMUST00000118930 291 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm14297-201ENSMUST00000129110 291 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm16362-201ENSMUST00000135189 214 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm25982-201ENSMUST00000157920 101 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.56□□□□□ -2.5
Trav2Q5R1I9 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Gm7240-201ENSMUST00000220769 664 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Gm25142-201ENSMUST00000082698 107 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Gm22365-201ENSMUST00000093750 117 ntBASIC-0.57□□□□□ -2.5
Trav2Q5R1I9 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.58□□□□□ -2.5
Trav2Q5R1I9 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.58□□□□□ -2.5
Trav2Q5R1I9 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC-0.58□□□□□ -2.5
Trav2Q5R1I9 Gm24035-201ENSMUST00000082867 107 ntBASIC-0.58□□□□□ -2.5
Trav2Q5R1I9 Rny3-201ENSMUST00000083011 102 ntBASIC-0.58□□□□□ -2.5
Trav2Q5R1I9 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.59□□□□□ -2.5
Trav2Q5R1I9 Gm25828-201ENSMUST00000157087 95 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm23412-201ENSMUST00000083017 107 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.6□□□□□ -2.51
Trav2Q5R1I9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm23655-201ENSMUST00000122627 105 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm25970-201ENSMUST00000157165 86 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm25771-201ENSMUST00000158565 144 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 CT025603.4-201ENSMUST00000225777 413 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.61□□□□□ -2.51
Trav2Q5R1I9 Gm26482-201ENSMUST00000158015 62 ntBASIC-0.62□□□□□ -2.51
Trav2Q5R1I9 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.62□□□□□ -2.51
Trav2Q5R1I9 Gm27997-201ENSMUST00000184942 69 ntBASIC-0.62□□□□□ -2.51
Trav2Q5R1I9 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.62□□□□□ -2.51
Trav2Q5R1I9 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.62□□□□□ -2.51
Trav2Q5R1I9 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm25848-201ENSMUST00000116790 144 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm26479-201ENSMUST00000122620 106 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm24290-201ENSMUST00000157634 96 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm24501-201ENSMUST00000158452 62 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm44419-201ENSMUST00000203338 229 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm22686-201ENSMUST00000082847 100 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.63□□□□□ -2.51
Trav2Q5R1I9 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm44149-201ENSMUST00000204256 226 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Snord42a-201ENSMUST00000082606 65 ntBASIC-0.64□□□□□ -2.51
Trav2Q5R1I9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.65□□□□□ -2.51
Trav2Q5R1I9 Gm22984-201ENSMUST00000122751 122 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm25424-201ENSMUST00000157612 58 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm22085-201ENSMUST00000158344 110 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm27672-201ENSMUST00000183751 204 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm22738-201ENSMUST00000083440 147 ntBASIC-0.66□□□□□ -2.52
Trav2Q5R1I9 Gm25875-201ENSMUST00000104323 107 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 156.8 ms