Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm25729-201ENSMUST00000179050 108 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25359-201ENSMUST00000179315 108 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm22624-201ENSMUST00000179913 108 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm18291-201ENSMUST00000190791 301 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm44419-201ENSMUST00000203338 229 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm5001-201ENSMUST00000204361 331 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm23625-201ENSMUST00000082457 100 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Gm22827-201ENSMUST00000083766 107 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 AC160984.1-201ENSMUST00000225855 3154 ntBASIC-1.16□□□□□ -2.6
Trav6d-4Q5R1I0 Mir18b-201ENSMUST00000103923 83 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 Gm23148-201ENSMUST00000180367 107 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 AC147101.1-201ENSMUST00000217964 312 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25258-201ENSMUST00000083049 107 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 Gm26497-201ENSMUST00000083146 107 ntBASIC-1.17□□□□□ -2.6
Trav6d-4Q5R1I0 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm13922-201ENSMUST00000119505 156 ntBASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm22321-201ENSMUST00000157152 104 ntBASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-1.18□□□□□ -2.6
Trav6d-4Q5R1I0 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 AC192333.2-201ENSMUST00000224771 196 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25859-201ENSMUST00000083710 91 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm26164-201ENSMUST00000083793 104 ntBASIC-1.19□□□□□ -2.6
Trav6d-4Q5R1I0 Gm14007-201ENSMUST00000118288 210 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm44311-201ENSMUST00000196448 69 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.2□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25431-201ENSMUST00000101978 107 ntBASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Gm27659-201ENSMUST00000183472 98 ntBASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.21□□□□□ -2.6
Trav6d-4Q5R1I0 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Snord67-201ENSMUST00000104033 111 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm24648-201ENSMUST00000157111 132 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm23025-201ENSMUST00000158769 111 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm27410-201ENSMUST00000183851 115 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm44487-201ENSMUST00000205145 325 ntBASIC-1.22□□□□□ -2.6
Trav6d-4Q5R1I0 Gm16550-201ENSMUST00000162550 126 ntBASIC-1.23□□□□□ -2.61
Trav6d-4Q5R1I0 Gm24315-201ENSMUST00000177835 127 ntBASIC-1.23□□□□□ -2.61
Trav6d-4Q5R1I0 AC167192.2-201ENSMUST00000224794 198 ntBASIC-1.23□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22578-201ENSMUST00000083730 107 ntBASIC-1.23□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22938-201ENSMUST00000103956 120 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22885-201ENSMUST00000157410 107 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26233-201ENSMUST00000175530 70 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 Zfp950-206ENSMUST00000178819 171 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 AC132437.1-201ENSMUST00000218308 320 ntBASIC-1.24□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25828-201ENSMUST00000157087 95 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm27639-201ENSMUST00000184937 85 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm6293-201ENSMUST00000050339 195 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26202-201ENSMUST00000082910 65 ntBASIC-1.25□□□□□ -2.61
Trav6d-4Q5R1I0 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm44615-201ENSMUST00000206548 358 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26437-201ENSMUST00000082595 105 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26107-201ENSMUST00000083972 107 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.26□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25909-201ENSMUST00000157619 121 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm24901-201ENSMUST00000158125 110 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25163-201ENSMUST00000158905 104 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm38268-201ENSMUST00000195813 193 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm44726-201ENSMUST00000203427 217 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Mir350-201ENSMUST00000083639 99 ntBASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
Trav6d-4Q5R1I0 Gm22771-201ENSMUST00000104449 91 ntBASIC-1.28□□□□□ -2.61
Trav6d-4Q5R1I0 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 193.7 ms