Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Snord82-201ENSMUST00000082889 70 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.07□□□□□ -2.42
Trav3-3Q5R1C3 Mir670-201ENSMUST00000102380 100 ntBASIC-0.08□□□□□ -2.42
Trav3-3Q5R1C3 AC211878.4-201ENSMUST00000220970 262 ntBASIC-0.08□□□□□ -2.42
Trav3-3Q5R1C3 Mir377-201ENSMUST00000083504 68 ntBASIC-0.08□□□□□ -2.42
Trav3-3Q5R1C3 Mir344-201ENSMUST00000083634 95 ntBASIC-0.08□□□□□ -2.42
Trav3-3Q5R1C3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-0.08□□□□□ -2.42
Trav3-3Q5R1C3 Scarna9-201ENSMUST00000104318 70 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm14567-201ENSMUST00000117155 174 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm11204-201ENSMUST00000122438 147 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm27747-201ENSMUST00000184707 85 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.09□□□□□ -2.42
Trav3-3Q5R1C3 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.1□□□□□ -2.43
Trav3-3Q5R1C3 Mir1197-201ENSMUST00000117037 120 ntBASIC-0.1□□□□□ -2.43
Trav3-3Q5R1C3 Gm23466-201ENSMUST00000157133 106 ntBASIC-0.1□□□□□ -2.43
Trav3-3Q5R1C3 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.1□□□□□ -2.43
Trav3-3Q5R1C3 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.1□□□□□ -2.43
Trav3-3Q5R1C3 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Gm16550-201ENSMUST00000162550 126 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Gm24208-201ENSMUST00000082783 135 ntBASIC-0.11□□□□□ -2.43
Trav3-3Q5R1C3 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm25416-201ENSMUST00000104221 107 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Snord100-201ENSMUST00000116836 74 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm22242-201ENSMUST00000175224 118 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Trav3-3Q5R1C3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Mir6369-201ENSMUST00000183772 106 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 AC154213.2-201ENSMUST00000227138 187 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Gm24929-201ENSMUST00000083403 139 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Mir382-201ENSMUST00000083494 76 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Gm24765-201ENSMUST00000083691 103 ntBASIC-0.13□□□□□ -2.43
Trav3-3Q5R1C3 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm24379-201ENSMUST00000122695 86 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm23214-201ENSMUST00000122716 157 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm42795-201ENSMUST00000198847 76 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Snord60-201ENSMUST00000082834 78 ntBASIC-0.14□□□□□ -2.43
Trav3-3Q5R1C3 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm24250-201ENSMUST00000157320 135 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Mir218-1-201ENSMUST00000083669 110 ntBASIC-0.15□□□□□ -2.43
Trav3-3Q5R1C3 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm24342-201ENSMUST00000103907 104 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Mir875-201ENSMUST00000104698 78 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm25267-201ENSMUST00000158522 63 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm23770-201ENSMUST00000178009 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm22832-201ENSMUST00000178022 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm23863-201ENSMUST00000178265 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm24828-201ENSMUST00000178507 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm23052-201ENSMUST00000178633 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm25729-201ENSMUST00000179050 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm25359-201ENSMUST00000179315 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm22624-201ENSMUST00000179913 108 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Mir30f-201ENSMUST00000196073 92 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.16□□□□□ -2.44
Trav3-3Q5R1C3 Gm25111-201ENSMUST00000116686 147 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Gm11420-201ENSMUST00000120047 402 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Gm26160-201ENSMUST00000158965 63 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Gm44469-201ENSMUST00000198558 79 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Gm26379-202ENSMUST00000200225 132 ntBASIC-0.17□□□□□ -2.44
Trav3-3Q5R1C3 Gm24594-201ENSMUST00000122502 99 ntBASIC-0.18□□□□□ -2.44
Trav3-3Q5R1C3 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.18□□□□□ -2.44
Trav3-3Q5R1C3 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.18□□□□□ -2.44
Trav3-3Q5R1C3 Gm23567-201ENSMUST00000178005 107 ntBASIC-0.18□□□□□ -2.44
Trav3-3Q5R1C3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC-0.18□□□□□ -2.44
Trav3-3Q5R1C3 CT030645.1-201ENSMUST00000224020 231 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms