Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gm21885-201ENSMUST00000178891 327 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm26138-201ENSMUST00000179236 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm22821-201ENSMUST00000179288 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm27399-201ENSMUST00000184250 78 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm23140-201ENSMUST00000082487 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Snora41-201ENSMUST00000082668 132 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm23298-201ENSMUST00000083181 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm24614-201ENSMUST00000083269 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm22057-201ENSMUST00000083387 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Mir193a-201ENSMUST00000083461 66 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm25516-201ENSMUST00000083857 107 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Snora2b-201ENSMUST00000084005 137 ntBASIC1.65□□□□□ -2.15
Cln6Q3U466 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Cln6Q3U466 Gm22425-201ENSMUST00000158532 138 ntBASIC1.64□□□□□ -2.15
Cln6Q3U466 Gm23375-201ENSMUST00000175407 83 ntBASIC1.64□□□□□ -2.15
Cln6Q3U466 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.64□□□□□ -2.15
Cln6Q3U466 Gm22772-201ENSMUST00000104451 121 ntBASIC1.63□□□□□ -2.15
Cln6Q3U466 Gm23654-201ENSMUST00000116758 126 ntBASIC1.63□□□□□ -2.15
Cln6Q3U466 Gm22403-201ENSMUST00000174919 84 ntBASIC1.63□□□□□ -2.15
Cln6Q3U466 Gm45429-201ENSMUST00000209527 172 ntBASIC1.63□□□□□ -2.15
Cln6Q3U466 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cln6Q3U466 Gm24274-201ENSMUST00000116787 124 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Cln6Q3U466 U6.1-201ENSMUST00000157443 101 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm26214-201ENSMUST00000158581 107 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm25241-201ENSMUST00000174909 84 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Mir3061-201ENSMUST00000175129 91 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm26217-201ENSMUST00000175212 84 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm22638-201ENSMUST00000179674 107 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm23299-201ENSMUST00000082708 79 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm26123-201ENSMUST00000083363 135 ntBASIC1.62□□□□□ -2.15
Cln6Q3U466 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cln6Q3U466 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cln6Q3U466 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Cln6Q3U466 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.61□□□□□ -2.15
Cln6Q3U466 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm25377-201ENSMUST00000104334 129 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm14674-201ENSMUST00000117816 342 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm5900-201ENSMUST00000179862 375 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm28270-201ENSMUST00000188550 109 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm28328-201ENSMUST00000188869 109 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm28256-201ENSMUST00000188953 139 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm28559-201ENSMUST00000190532 139 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm44477-201ENSMUST00000199661 110 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.61□□□□□ -2.15
Cln6Q3U466 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Cln6Q3U466 Gm25094-201ENSMUST00000103992 131 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Gm24877-201ENSMUST00000158779 116 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Gm27544-201ENSMUST00000185069 155 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Gm44462-201ENSMUST00000199696 129 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Gm44807-201ENSMUST00000206115 154 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.6□□□□□ -2.15
Cln6Q3U466 AC124687.1-201ENSMUST00000221868 189 ntBASIC1.6□□□□□ -2.15
Cln6Q3U466 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.15
Cln6Q3U466 Gm22004-201ENSMUST00000101884 107 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Snord78-201ENSMUST00000104032 66 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Gm24468-201ENSMUST00000104489 104 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Gm25011-201ENSMUST00000158398 126 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Gm22200-201ENSMUST00000158614 67 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Gm27511-201ENSMUST00000183502 127 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.59□□□□□ -2.15
Cln6Q3U466 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Cln6Q3U466 Gm25544-201ENSMUST00000122676 120 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 Gm24229-201ENSMUST00000158830 118 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 Traj61-201ENSMUST00000165025 72 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 Gm25069-201ENSMUST00000175238 86 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 Mir6993-201ENSMUST00000184912 65 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.58□□□□□ -2.16
Cln6Q3U466 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cln6Q3U466 Mir544-201ENSMUST00000103813 78 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm25610-201ENSMUST00000104016 129 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm25680-201ENSMUST00000116917 126 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm22635-201ENSMUST00000116962 126 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm25423-201ENSMUST00000157609 107 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm25838-201ENSMUST00000158920 120 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Snora24-201ENSMUST00000174989 130 ntBASIC1.57□□□□□ -2.16
Cln6Q3U466 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Cln6Q3U466 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cln6Q3U466 Mir450b-201ENSMUST00000102095 82 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm24649-201ENSMUST00000157106 134 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm23170-201ENSMUST00000157158 106 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm25329-201ENSMUST00000158041 126 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm25678-201ENSMUST00000174984 73 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm25035-201ENSMUST00000175414 77 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm23860-201ENSMUST00000179446 132 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Mir7675-201ENSMUST00000184262 58 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Gm25038-201ENSMUST00000082928 130 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Mir222-201ENSMUST00000083537 79 ntBASIC1.56□□□□□ -2.16
Cln6Q3U466 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Cln6Q3U466 Gm25529-201ENSMUST00000104850 92 ntBASIC1.55□□□□□ -2.16
Cln6Q3U466 Mir1195-201ENSMUST00000116818 98 ntBASIC1.55□□□□□ -2.16
Cln6Q3U466 Gm12941-201ENSMUST00000117934 220 ntBASIC1.55□□□□□ -2.16
Cln6Q3U466 Gm11598-201ENSMUST00000119257 357 ntBASIC1.55□□□□□ -2.16
Cln6Q3U466 Gm16328-201ENSMUST00000126985 196 ntBASIC1.55□□□□□ -2.16
Cln6Q3U466 Gm22815-201ENSMUST00000157451 62 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms