Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col6a1Q04857 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Col6a1Q04857 Gm23060-201ENSMUST00000102345 109 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm25090-201ENSMUST00000104000 132 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Snord78-201ENSMUST00000104032 66 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm22486-201ENSMUST00000116815 137 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm22071-201ENSMUST00000116857 83 ntBASIC2.54□□□□□ -2
Col6a1Q04857 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm22332-201ENSMUST00000158072 126 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm3852-201ENSMUST00000182781 264 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm29535-201ENSMUST00000185723 109 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm28143-201ENSMUST00000191082 109 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm45268-201ENSMUST00000210046 370 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Gm8031-201ENSMUST00000213430 626 ntBASIC2.54□□□□□ -2
Col6a1Q04857 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.54□□□□□ -2
Col6a1Q04857 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col6a1Q04857 Gm22772-201ENSMUST00000104451 121 ntBASIC2.53□□□□□ -2
Col6a1Q04857 Gm22679-201ENSMUST00000116975 100 ntBASIC2.53□□□□□ -2
Col6a1Q04857 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.53□□□□□ -2
Col6a1Q04857 Mir669n-201ENSMUST00000158636 54 ntBASIC2.53□□□□□ -2
Col6a1Q04857 Gm43722-201ENSMUST00000196054 124 ntBASIC2.53□□□□□ -2
Col6a1Q04857 Gm22827-201ENSMUST00000083766 107 ntBASIC2.53□□□□□ -2
Col6a1Q04857 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Col6a1Q04857 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col6a1Q04857 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col6a1Q04857 Gm23033-201ENSMUST00000157996 134 ntBASIC2.52□□□□□ -2.01
Col6a1Q04857 Gm24345-201ENSMUST00000158706 124 ntBASIC2.52□□□□□ -2.01
Col6a1Q04857 Gm22454-201ENSMUST00000082583 107 ntBASIC2.52□□□□□ -2.01
Col6a1Q04857 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col6a1Q04857 Gm26339-201ENSMUST00000102368 99 ntBASIC2.51□□□□□ -2.01
Col6a1Q04857 Gm24475-201ENSMUST00000157435 143 ntBASIC2.51□□□□□ -2.01
Col6a1Q04857 Gm23181-201ENSMUST00000158685 110 ntBASIC2.51□□□□□ -2.01
Col6a1Q04857 Gm37557-201ENSMUST00000191640 139 ntBASIC2.51□□□□□ -2.01
Col6a1Q04857 Snora41-201ENSMUST00000082668 132 ntBASIC2.51□□□□□ -2.01
Col6a1Q04857 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Col6a1Q04857 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a1Q04857 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a1Q04857 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.5□□□□□ -2.01
Col6a1Q04857 Gm22963-201ENSMUST00000157960 91 ntBASIC2.5□□□□□ -2.01
Col6a1Q04857 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.5□□□□□ -2.01
Col6a1Q04857 Mir429-201ENSMUST00000083493 83 ntBASIC2.5□□□□□ -2.01
Col6a1Q04857 Mir411-201ENSMUST00000083543 82 ntBASIC2.5□□□□□ -2.01
Col6a1Q04857 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col6a1Q04857 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col6a1Q04857 Gm22319-201ENSMUST00000157147 122 ntBASIC2.49□□□□□ -2.01
Col6a1Q04857 Gm23384-201ENSMUST00000158593 103 ntBASIC2.49□□□□□ -2.01
Col6a1Q04857 Gm25836-201ENSMUST00000158918 123 ntBASIC2.49□□□□□ -2.01
Col6a1Q04857 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.49□□□□□ -2.01
Col6a1Q04857 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col6a1Q04857 Gm24668-201ENSMUST00000158935 104 ntBASIC2.48□□□□□ -2.01
Col6a1Q04857 Gm26073-201ENSMUST00000179906 127 ntBASIC2.48□□□□□ -2.01
Col6a1Q04857 Snora20-201ENSMUST00000082703 128 ntBASIC2.48□□□□□ -2.01
Col6a1Q04857 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Col6a1Q04857 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm24649-201ENSMUST00000157106 134 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm24851-201ENSMUST00000158028 103 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Traj61-201ENSMUST00000165025 72 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm25633-201ENSMUST00000178565 107 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm23370-201ENSMUST00000199545 130 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm45522-201ENSMUST00000210784 166 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm22805-201ENSMUST00000082739 107 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Mir93-201ENSMUST00000083593 88 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm22723-201ENSMUST00000083820 129 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm24697-201ENSMUST00000083881 107 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Mir490-201ENSMUST00000093567 84 ntBASIC2.47□□□□□ -2.01
Col6a1Q04857 Gm23986-201ENSMUST00000157144 63 ntBASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm25788-201ENSMUST00000082721 131 ntBASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm25357-201ENSMUST00000082745 72 ntBASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm24524-201ENSMUST00000082925 170 ntBASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm23790-201ENSMUST00000083013 107 ntBASIC2.46□□□□□ -2.02
Col6a1Q04857 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm23109-201ENSMUST00000116867 126 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm24394-201ENSMUST00000158141 123 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm22159-201ENSMUST00000158412 130 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm22888-201ENSMUST00000158640 77 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm22743-201ENSMUST00000083445 133 ntBASIC2.45□□□□□ -2.02
Col6a1Q04857 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Col6a1Q04857 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Col6a1Q04857 Gm25368-201ENSMUST00000158847 131 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm22129-201ENSMUST00000179034 107 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm3724-201ENSMUST00000197957 349 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm22354-201ENSMUST00000083919 70 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.44□□□□□ -2.02
Col6a1Q04857 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Col6a1Q04857 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col6a1Q04857 Mir880-201ENSMUST00000104809 78 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.43□□□□□ -2.02
Col6a1Q04857 Gm22815-201ENSMUST00000157451 62 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Gm23349-201ENSMUST00000158432 98 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Gm24656-201ENSMUST00000177548 132 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Gm24313-201ENSMUST00000082561 133 ntBASIC2.43□□□□□ -2.02
Col6a1Q04857 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Col6a1Q04857 Gm25610-201ENSMUST00000104016 129 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms