Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm22866-201ENSMUST00000083947 177 ntBASIC2.22□□□□□ -2.05
Msx2Q03358 Mir451a-201ENSMUST00000093557 72 ntBASIC2.22□□□□□ -2.05
Msx2Q03358 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Msx2Q03358 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Msx2Q03358 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Msx2Q03358 Gm26154-201ENSMUST00000102339 96 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Mir344c-201ENSMUST00000103919 92 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Gm11856-201ENSMUST00000118712 276 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Gm24771-201ENSMUST00000158508 137 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Mir6388-201ENSMUST00000184417 75 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Snord80-201ENSMUST00000083801 81 ntBASIC2.21□□□□□ -2.06
Msx2Q03358 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Msx2Q03358 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Msx2Q03358 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Msx2Q03358 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 Gm14923-201ENSMUST00000118270 155 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 Mir5619-201ENSMUST00000176065 61 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 Gm27505-201ENSMUST00000185071 110 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 Mir93-201ENSMUST00000083593 88 ntBASIC2.2□□□□□ -2.06
Msx2Q03358 Gm22672-201ENSMUST00000104414 134 ntBASIC2.19□□□□□ -2.06
Msx2Q03358 Gm22540-201ENSMUST00000158168 117 ntBASIC2.19□□□□□ -2.06
Msx2Q03358 Gm44807-201ENSMUST00000206115 154 ntBASIC2.19□□□□□ -2.06
Msx2Q03358 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.19□□□□□ -2.06
Msx2Q03358 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Msx2Q03358 Gm22750-201ENSMUST00000102076 103 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm22089-201ENSMUST00000158336 102 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.18□□□□□ -2.06
Msx2Q03358 Gm20477-201ENSMUST00000174028 280 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm24801-201ENSMUST00000178503 105 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm25449-201ENSMUST00000179389 79 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm45471-201ENSMUST00000211270 281 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.18□□□□□ -2.06
Msx2Q03358 Mir682-201ENSMUST00000102281 96 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Gm25485-201ENSMUST00000104120 132 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Gm22674-201ENSMUST00000104413 131 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Gm14588-201ENSMUST00000119895 172 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Gm24937-201ENSMUST00000122597 134 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.17□□□□□ -2.06
Msx2Q03358 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.17□□□□□ -2.06
Msx2Q03358 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.17□□□□□ -2.06
Msx2Q03358 Mir802-201ENSMUST00000103258 97 ntBASIC2.16□□□□□ -2.06
Msx2Q03358 Gm25611-201ENSMUST00000104017 133 ntBASIC2.16□□□□□ -2.06
Msx2Q03358 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.16□□□□□ -2.06
Msx2Q03358 Gm23996-201ENSMUST00000158062 131 ntBASIC2.16□□□□□ -2.06
Msx2Q03358 Gm23065-201ENSMUST00000158236 130 ntBASIC2.16□□□□□ -2.06
Msx2Q03358 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Msx2Q03358 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.15□□□□□ -2.06
Msx2Q03358 Gm11248-201ENSMUST00000119568 201 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm23656-201ENSMUST00000122626 112 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm25329-201ENSMUST00000158041 126 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm23963-201ENSMUST00000179603 77 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm42935-201ENSMUST00000202004 151 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm24044-201ENSMUST00000083107 156 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Snora69-201ENSMUST00000083708 131 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Gm25337-201ENSMUST00000083723 104 ntBASIC2.15□□□□□ -2.07
Msx2Q03358 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Msx2Q03358 Gm16510-201ENSMUST00000153501 249 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm22554-201ENSMUST00000157798 147 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm22503-201ENSMUST00000158983 115 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Mir6379-201ENSMUST00000183392 115 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm37557-201ENSMUST00000191640 139 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm45452-201ENSMUST00000210905 177 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm26123-201ENSMUST00000083363 135 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Mir300-201ENSMUST00000083485 79 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.14□□□□□ -2.07
Msx2Q03358 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Msx2Q03358 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Msx2Q03358 Gm26213-201ENSMUST00000158582 110 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Trbv25-201ENSMUST00000194700 273 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Gm22622-201ENSMUST00000082870 129 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Snord7-201ENSMUST00000083781 97 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Gm24698-201ENSMUST00000083883 130 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Msx2Q03358 Mir1a-1-201ENSMUST00000093635 77 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.13□□□□□ -2.07
Msx2Q03358 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Msx2Q03358 Gm22815-201ENSMUST00000157451 62 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm25866-201ENSMUST00000158245 112 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm25368-201ENSMUST00000158847 131 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm16561-201ENSMUST00000163001 192 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm25241-201ENSMUST00000174909 84 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Mir3086-201ENSMUST00000175072 87 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm26217-201ENSMUST00000175212 84 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Gm25750-201ENSMUST00000175483 112 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Mir7013-201ENSMUST00000183540 72 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.12□□□□□ -2.07
Msx2Q03358 Gm24203-201ENSMUST00000082949 114 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Snora3-201ENSMUST00000083082 132 ntBASIC2.12□□□□□ -2.07
Msx2Q03358 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Msx2Q03358 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Msx2Q03358 Gm25153-201ENSMUST00000157118 156 ntBASIC2.11□□□□□ -2.07
Msx2Q03358 Gm25707-201ENSMUST00000175120 96 ntBASIC2.11□□□□□ -2.07
Msx2Q03358 Snord43-201ENSMUST00000199549 108 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms