Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm25267-201ENSMUST00000158522 63 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm16539-201ENSMUST00000160086 327 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm16404-201ENSMUST00000177739 468 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm14598-201ENSMUST00000180109 468 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm14625-201ENSMUST00000180231 468 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm27980-201ENSMUST00000184094 169 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm44989-201ENSMUST00000204749 217 ntBASIC0.65□□□□□ -2.31
Sox3P53784 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm24929-201ENSMUST00000083403 139 ntBASIC0.65□□□□□ -2.31
Sox3P53784 Gm26293-201ENSMUST00000104170 84 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm25323-201ENSMUST00000122555 103 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm23605-201ENSMUST00000157255 127 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm25184-201ENSMUST00000157753 163 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm26090-201ENSMUST00000157897 128 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm22675-201ENSMUST00000158430 104 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.64□□□□□ -2.31
Sox3P53784 Gm44409-201ENSMUST00000198810 166 ntBASIC0.64□□□□□ -2.31
Sox3P53784 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Mir362-201ENSMUST00000093592 65 ntBASIC0.64□□□□□ -2.31
Sox3P53784 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Sox3P53784 Mir466b-8-201ENSMUST00000103883 86 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm6272-201ENSMUST00000121256 171 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm24559-201ENSMUST00000157519 121 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Mir466e-201ENSMUST00000198862 84 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Mir466c-1-201ENSMUST00000200654 84 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Mir33-201ENSMUST00000083531 69 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm24762-201ENSMUST00000083689 104 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm25895-201ENSMUST00000083714 100 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Sox3P53784 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.63□□□□□ -2.31
Sox3P53784 Gm23203-201ENSMUST00000104374 107 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm26156-201ENSMUST00000116999 123 ntBASIC0.62□□□□□ -2.31
Sox3P53784 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm24381-201ENSMUST00000122697 104 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm24729-201ENSMUST00000158225 137 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm23977-201ENSMUST00000177871 74 ntBASIC0.62□□□□□ -2.31
Sox3P53784 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm24208-201ENSMUST00000082783 135 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.62□□□□□ -2.31
Sox3P53784 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.62□□□□□ -2.31
Sox3P53784 Mir547-201ENSMUST00000102051 78 ntBASIC0.61□□□□□ -2.31
Sox3P53784 Gm24867-201ENSMUST00000104161 107 ntBASIC0.61□□□□□ -2.31
Sox3P53784 AC161426.1-201ENSMUST00000214137 286 ntBASIC0.61□□□□□ -2.31
Sox3P53784 Snord33-201ENSMUST00000083694 84 ntBASIC0.61□□□□□ -2.31
Sox3P53784 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Sox3P53784 Gm26279-201ENSMUST00000157095 102 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm25885-201ENSMUST00000157779 109 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm24747-201ENSMUST00000157835 87 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm25494-201ENSMUST00000158143 100 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm26160-201ENSMUST00000158965 63 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm28435-201ENSMUST00000185496 108 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Mir6375-201ENSMUST00000197176 95 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Gm19790-201ENSMUST00000214414 251 ntBASIC0.6□□□□□ -2.31
Sox3P53784 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.6□□□□□ -2.31
Sox3P53784 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.59□□□□□ -2.31
Sox3P53784 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Sox3P53784 Gm23545-201ENSMUST00000158205 104 ntBASIC0.59□□□□□ -2.31
Sox3P53784 Gm23375-201ENSMUST00000175407 83 ntBASIC0.59□□□□□ -2.31
Sox3P53784 Gm22801-201ENSMUST00000175624 84 ntBASIC0.59□□□□□ -2.31
Sox3P53784 Gm23141-201ENSMUST00000178682 94 ntBASIC0.59□□□□□ -2.31
Sox3P53784 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.59□□□□□ -2.31
Sox3P53784 Gm13345-201ENSMUST00000121928 228 ntBASIC0.58□□□□□ -2.32
Sox3P53784 Gm25654-201ENSMUST00000158467 88 ntBASIC0.58□□□□□ -2.32
Sox3P53784 Gm25464-201ENSMUST00000175481 107 ntBASIC0.58□□□□□ -2.32
Sox3P53784 Gm27672-201ENSMUST00000183751 204 ntBASIC0.58□□□□□ -2.32
Sox3P53784 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Sox3P53784 Gm43944-201ENSMUST00000205220 120 ntBASIC0.58□□□□□ -2.32
Sox3P53784 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.58□□□□□ -2.32
Sox3P53784 Mir186-201ENSMUST00000083497 71 ntBASIC0.58□□□□□ -2.32
Sox3P53784 Gm25544-201ENSMUST00000122676 120 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm25968-201ENSMUST00000157167 100 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm25390-201ENSMUST00000157341 103 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm27579-201ENSMUST00000158113 63 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Mir6904-201ENSMUST00000183443 67 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm28724-201ENSMUST00000186149 625 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm38364-201ENSMUST00000191814 179 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Sox3P53784 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.57□□□□□ -2.32
Sox3P53784 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.57□□□□□ -2.32
Sox3P53784 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.57□□□□□ -2.32
Sox3P53784 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Gm24616-201ENSMUST00000083274 139 ntBASIC0.57□□□□□ -2.32
Sox3P53784 Mir466p-201ENSMUST00000103925 89 ntBASIC0.56□□□□□ -2.32
Sox3P53784 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.56□□□□□ -2.32
Sox3P53784 Gm27402-201ENSMUST00000183890 120 ntBASIC0.56□□□□□ -2.32
Sox3P53784 Mir7077-201ENSMUST00000183991 57 ntBASIC0.56□□□□□ -2.32
Sox3P53784 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Sox3P53784 Gm24793-201ENSMUST00000104289 132 ntBASIC0.55□□□□□ -2.32
Sox3P53784 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Sox3P53784 Gm14838-201ENSMUST00000118913 248 ntBASIC0.55□□□□□ -2.32
Sox3P53784 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.55□□□□□ -2.32
Sox3P53784 Gm22482-201ENSMUST00000122563 359 ntBASIC0.55□□□□□ -2.32
Sox3P53784 mt-Td-201ENSMUST00000082404 70 ntBASIC0.55□□□□□ -2.32
Sox3P53784 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.55□□□□□ -2.32
Sox3P53784 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Sox3P53784 Gm26076-201ENSMUST00000104065 105 ntBASIC0.54□□□□□ -2.32
Sox3P53784 Snord100-201ENSMUST00000116836 74 ntBASIC0.54□□□□□ -2.32
Sox3P53784 Mir1898-201ENSMUST00000122643 83 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 851.8 ms