Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm24206-201ENSMUST00000179011 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm24528-201ENSMUST00000179164 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm22909-201ENSMUST00000179190 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm26334-201ENSMUST00000179403 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm25463-201ENSMUST00000179405 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm25742-201ENSMUST00000179530 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm25209-201ENSMUST00000179576 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm26392-201ENSMUST00000179661 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm25230-201ENSMUST00000179740 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm26434-201ENSMUST00000179778 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm25741-201ENSMUST00000179825 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm24759-201ENSMUST00000179827 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm24219-201ENSMUST00000179861 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Mir6950-201ENSMUST00000184438 73 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp4P35123 Mir451a-201ENSMUST00000093557 72 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Gm23254-201ENSMUST00000097244 79 ntBASIC2.04□□□□□ -2.08
Usp4P35123 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp4P35123 Mir880-201ENSMUST00000104809 78 ntBASIC2.03□□□□□ -2.08
Usp4P35123 Gm22196-201ENSMUST00000116865 109 ntBASIC2.03□□□□□ -2.08
Usp4P35123 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.03□□□□□ -2.08
Usp4P35123 Gm24783-201ENSMUST00000157639 100 ntBASIC2.03□□□□□ -2.08
Usp4P35123 Mir6905-201ENSMUST00000184228 70 ntBASIC2.03□□□□□ -2.08
Usp4P35123 Gm37579-201ENSMUST00000194291 142 ntBASIC2.03□□□□□ -2.08
Usp4P35123 Gm25090-201ENSMUST00000104000 132 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Mir3096-201ENSMUST00000116685 71 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Gm11792-201ENSMUST00000120640 168 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Gm26090-201ENSMUST00000157897 128 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Gm45654-201ENSMUST00000210980 123 ntBASIC2.02□□□□□ -2.09
Usp4P35123 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Gm22723-201ENSMUST00000083820 129 ntBASIC2.02□□□□□ -2.09
Usp4P35123 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Usp4P35123 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Usp4P35123 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Usp4P35123 Gm23010-201ENSMUST00000104151 126 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Gm12309-201ENSMUST00000119889 182 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Gm24478-201ENSMUST00000157439 158 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Gm26213-201ENSMUST00000158582 110 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Mir3086-201ENSMUST00000175072 87 ntBASIC2.01□□□□□ -2.09
Usp4P35123 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Usp4P35123 Gm22055-201ENSMUST00000083388 107 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Mir411-201ENSMUST00000083543 82 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Mir107-201ENSMUST00000083660 87 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.01□□□□□ -2.09
Usp4P35123 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm37602-201ENSMUST00000195187 3310 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm12013-201ENSMUST00000121971 155 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm22451-201ENSMUST00000122803 151 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm25113-201ENSMUST00000157185 143 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm25836-201ENSMUST00000158918 123 ntBASIC2□□□□□ -2.09
Usp4P35123 Gm37330-201ENSMUST00000192606 153 ntBASIC2□□□□□ -2.09
Usp4P35123 Snora2b-201ENSMUST00000084005 137 ntBASIC2□□□□□ -2.09
Usp4P35123 Mir758-201ENSMUST00000103260 81 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm25380-201ENSMUST00000175463 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm24572-201ENSMUST00000175505 88 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm24641-201ENSMUST00000178055 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm25484-201ENSMUST00000178217 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm26138-201ENSMUST00000179236 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm22821-201ENSMUST00000179288 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm27645-201ENSMUST00000183348 77 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm27722-201ENSMUST00000183908 76 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm42795-201ENSMUST00000198847 76 ntBASIC1.99□□□□□ -2.09
Usp4P35123 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.99□□□□□ -2.09
Usp4P35123 AC126939.1-201ENSMUST00000224943 226 ntBASIC1.99□□□□□ -2.09
Usp4P35123 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm23140-201ENSMUST00000082487 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm23298-201ENSMUST00000083181 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm24614-201ENSMUST00000083269 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm22057-201ENSMUST00000083387 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm25516-201ENSMUST00000083857 107 ntBASIC1.99□□□□□ -2.09
Usp4P35123 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Mir450b-201ENSMUST00000102095 82 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm24913-201ENSMUST00000157286 107 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm23996-201ENSMUST00000158062 131 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm25658-201ENSMUST00000158472 128 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Mir669n-201ENSMUST00000158636 54 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm20409-201ENSMUST00000173457 130 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm25069-201ENSMUST00000175238 86 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Mir6379-201ENSMUST00000183392 115 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Mir7683-201ENSMUST00000183842 61 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Mir7021-201ENSMUST00000197026 63 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usp4P35123 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm25636-201ENSMUST00000082666 133 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm26922-201ENSMUST00000082687 72 ntBASIC1.98□□□□□ -2.09
Usp4P35123 Gm23083-201ENSMUST00000157851 116 ntBASIC1.97□□□□□ -2.09
Usp4P35123 Mir7225-201ENSMUST00000184178 54 ntBASIC1.97□□□□□ -2.09
Usp4P35123 mt-Ts2-201ENSMUST00000082416 59 ntBASIC1.97□□□□□ -2.09
Usp4P35123 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Usp4P35123 Gm25753-201ENSMUST00000116792 121 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.96□□□□□ -2.1
Usp4P35123 Gm23289-201ENSMUST00000175615 108 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Gm26498-201ENSMUST00000177799 79 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Gm26230-201ENSMUST00000180141 79 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Gm27443-201ENSMUST00000184660 98 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Gm22884-201ENSMUST00000083127 140 ntBASIC1.96□□□□□ -2.1
Usp4P35123 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Usp4P35123 Gm16328-201ENSMUST00000126985 196 ntBASIC1.95□□□□□ -2.1
Usp4P35123 Gm15692-201ENSMUST00000152173 352 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms