Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm26076-201ENSMUST00000104065 105 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm25318-201ENSMUST00000122554 314 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm23466-201ENSMUST00000157133 106 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm22767-201ENSMUST00000158365 165 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm23020-201ENSMUST00000158766 253 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.22□□□□□ -2.37
Cdx1P18111 Gm37715-201ENSMUST00000193206 235 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm44373-201ENSMUST00000196112 169 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Mir3970-201ENSMUST00000199287 90 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm45541-201ENSMUST00000210443 54 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Mir141-201ENSMUST00000083540 72 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.22□□□□□ -2.37
Cdx1P18111 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.22□□□□□ -2.37
Cdx1P18111 Gm12771-201ENSMUST00000120246 135 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 Gm13339-201ENSMUST00000120651 510 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.21□□□□□ -2.38
Cdx1P18111 Mir146-201ENSMUST00000083667 65 ntBASIC0.21□□□□□ -2.38
Cdx1P18111 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
Cdx1P18111 Gm25111-201ENSMUST00000116686 147 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm22051-201ENSMUST00000117002 127 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm13922-201ENSMUST00000119505 156 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm11388-201ENSMUST00000120908 159 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm25323-201ENSMUST00000122555 103 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm22706-201ENSMUST00000157907 112 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm24724-201ENSMUST00000158230 107 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm27585-201ENSMUST00000183717 199 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.2□□□□□ -2.38
Cdx1P18111 Gm6003-201ENSMUST00000187903 463 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm38019-201ENSMUST00000195133 380 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.2□□□□□ -2.38
Cdx1P18111 Gm22686-201ENSMUST00000082847 100 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Gm24762-201ENSMUST00000083689 104 ntBASIC0.2□□□□□ -2.38
Cdx1P18111 Snord69-201ENSMUST00000104024 80 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Mir669i-201ENSMUST00000117007 127 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Gm11322-201ENSMUST00000118095 435 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.19□□□□□ -2.38
Cdx1P18111 Gm25720-201ENSMUST00000157503 105 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Gm22887-201ENSMUST00000178586 107 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Gm25814-201ENSMUST00000082754 107 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Mir532-201ENSMUST00000093630 96 ntBASIC0.19□□□□□ -2.38
Cdx1P18111 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm15289-201ENSMUST00000117793 244 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm11204-201ENSMUST00000122438 147 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm24509-201ENSMUST00000157086 101 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm25358-201ENSMUST00000157189 101 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm23838-201ENSMUST00000158067 162 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm25771-201ENSMUST00000158565 144 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm24547-201ENSMUST00000158649 149 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm25300-201ENSMUST00000175284 84 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Mir3089-201ENSMUST00000175350 84 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Mir669k-201ENSMUST00000177742 127 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm25673-201ENSMUST00000179957 127 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm26123-201ENSMUST00000083363 135 ntBASIC0.18□□□□□ -2.38
Cdx1P18111 Gm24793-201ENSMUST00000104289 132 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm26026-201ENSMUST00000122726 123 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm24549-201ENSMUST00000158647 139 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm25464-201ENSMUST00000175481 107 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm27402-201ENSMUST00000183890 120 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Mir6390-201ENSMUST00000184405 129 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm42623-201ENSMUST00000197225 379 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm45859-201ENSMUST00000212794 214 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
Cdx1P18111 Gm24929-201ENSMUST00000083403 139 ntBASIC0.17□□□□□ -2.38
Cdx1P18111 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
Cdx1P18111 Mir881-201ENSMUST00000104844 78 ntBASIC0.16□□□□□ -2.38
Cdx1P18111 Gm25241-201ENSMUST00000174909 84 ntBASIC0.16□□□□□ -2.38
Cdx1P18111 Gm26217-201ENSMUST00000175212 84 ntBASIC0.16□□□□□ -2.38
Cdx1P18111 Gm27717-201ENSMUST00000183933 151 ntBASIC0.16□□□□□ -2.38
Cdx1P18111 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.38
Cdx1P18111 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
Cdx1P18111 Gm6952-201ENSMUST00000118629 159 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm13345-201ENSMUST00000121928 228 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm23036-201ENSMUST00000157885 99 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm25494-201ENSMUST00000158143 100 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm22466-201ENSMUST00000175278 69 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm27672-201ENSMUST00000183751 204 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm22358-201ENSMUST00000082877 122 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm23679-201ENSMUST00000083161 119 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Mir384-201ENSMUST00000083565 88 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm22753-201ENSMUST00000083657 107 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm25188-201ENSMUST00000083913 122 ntBASIC0.15□□□□□ -2.39
Cdx1P18111 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm24867-201ENSMUST00000104161 107 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm23749-201ENSMUST00000104223 131 ntBASIC0.14□□□□□ -2.39
Cdx1P18111 Gm23989-201ENSMUST00000117030 66 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms