Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm23911-201ENSMUST00000104596 134 ntBASIC2.72□□□□□ -1.97
Msx1P13297 Gm25153-201ENSMUST00000157118 156 ntBASIC2.72□□□□□ -1.97
Msx1P13297 Mir5118-201ENSMUST00000175551 67 ntBASIC2.72□□□□□ -1.97
Msx1P13297 Gm24495-201ENSMUST00000178575 79 ntBASIC2.72□□□□□ -1.97
Msx1P13297 Gm22253-201ENSMUST00000179870 79 ntBASIC2.72□□□□□ -1.97
Msx1P13297 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Msx1P13297 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Msx1P13297 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
Msx1P13297 Mir878-201ENSMUST00000104680 78 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm9009-201ENSMUST00000117321 326 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm24064-201ENSMUST00000157486 106 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm25044-201ENSMUST00000158603 104 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm22095-201ENSMUST00000158984 150 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm25996-201ENSMUST00000175393 117 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.71□□□□□ -1.98
Msx1P13297 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm34314-201ENSMUST00000203622 367 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm25899-201ENSMUST00000082672 141 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm26062-201ENSMUST00000083379 107 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.71□□□□□ -1.98
Msx1P13297 Mir20b-201ENSMUST00000102087 80 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Gm25847-201ENSMUST00000116793 96 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Gm22666-201ENSMUST00000158717 164 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Mir3076-201ENSMUST00000175415 60 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Snora3-201ENSMUST00000083082 132 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Gm24412-201ENSMUST00000083426 109 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
Msx1P13297 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.7□□□□□ -1.98
Msx1P13297 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Msx1P13297 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Msx1P13297 Gm22151-201ENSMUST00000116963 58 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm22082-201ENSMUST00000157587 161 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm20477-201ENSMUST00000174028 280 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm7258-201ENSMUST00000179317 300 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Msx1P13297 Gm28900-201ENSMUST00000185232 156 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Mir30f-201ENSMUST00000196073 92 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm22884-201ENSMUST00000083127 140 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Gm24162-201ENSMUST00000093665 102 ntBASIC2.69□□□□□ -1.98
Msx1P13297 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Msx1P13297 Gm25417-201ENSMUST00000104212 131 ntBASIC2.68□□□□□ -1.98
Msx1P13297 Gm23325-201ENSMUST00000157422 129 ntBASIC2.68□□□□□ -1.98
Msx1P13297 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.68□□□□□ -1.98
Msx1P13297 Mir5117-201ENSMUST00000083226 84 ntBASIC2.68□□□□□ -1.98
Msx1P13297 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Msx1P13297 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Msx1P13297 Mir499-201ENSMUST00000102357 79 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm24049-201ENSMUST00000102409 100 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm26247-201ENSMUST00000116702 91 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm14588-201ENSMUST00000119895 172 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm24384-201ENSMUST00000122693 75 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm25280-201ENSMUST00000157269 101 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm16539-201ENSMUST00000160086 327 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Mir6369-201ENSMUST00000183772 106 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm27419-201ENSMUST00000184576 109 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Mir6405-201ENSMUST00000184584 124 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm8031-201ENSMUST00000213430 626 ntBASIC2.67□□□□□ -1.98
Msx1P13297 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm25635-201ENSMUST00000082675 131 ntBASIC2.67□□□□□ -1.98
Msx1P13297 Gm25949-201ENSMUST00000175333 114 ntBASIC2.66□□□□□ -1.98
Msx1P13297 Gm25528-201ENSMUST00000180264 132 ntBASIC2.66□□□□□ -1.98
Msx1P13297 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.66□□□□□ -1.98
Msx1P13297 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC2.66□□□□□ -1.98
Msx1P13297 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Msx1P13297 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Msx1P13297 Gm24988-201ENSMUST00000104460 121 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm26342-201ENSMUST00000104557 129 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm14884-201ENSMUST00000120456 196 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm22732-201ENSMUST00000158093 121 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm24922-201ENSMUST00000158511 102 ntBASIC2.65□□□□□ -1.99
Msx1P13297 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm7214-201ENSMUST00000222428 272 ntBASIC2.65□□□□□ -1.99
Msx1P13297 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm23128-201ENSMUST00000104257 132 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Msx1P13297 Mir1197-201ENSMUST00000117037 120 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.64□□□□□ -1.99
Msx1P13297 Gm26290-201ENSMUST00000158891 145 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm16111-201ENSMUST00000162128 285 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm23128-202ENSMUST00000196578 133 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm23376-201ENSMUST00000082938 160 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Gm24523-201ENSMUST00000083965 132 ntBASIC2.64□□□□□ -1.99
Msx1P13297 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Msx1P13297 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Msx1P13297 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.63□□□□□ -1.99
Msx1P13297 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.63□□□□□ -1.99
Msx1P13297 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 321.5 ms