Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.71□□□□□ -2.3
Col5a1O88207 Gm14671-201ENSMUST00000121790 262 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm23656-201ENSMUST00000122626 112 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm24915-201ENSMUST00000157288 78 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm25884-201ENSMUST00000157782 62 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm22557-201ENSMUST00000157804 102 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm23277-201ENSMUST00000157914 136 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm23209-201ENSMUST00000158667 110 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm24106-201ENSMUST00000175498 127 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm22348-201ENSMUST00000178674 79 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm25936-201ENSMUST00000179952 114 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm20118-201ENSMUST00000187207 162 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm2077-201ENSMUST00000195017 319 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm42623-201ENSMUST00000197225 379 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm25683-201ENSMUST00000083940 131 ntBASIC0.7□□□□□ -2.3
Col5a1O88207 Gm22148-201ENSMUST00000104445 107 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm24683-201ENSMUST00000104840 88 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm23172-201ENSMUST00000157160 124 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm23113-201ENSMUST00000158477 99 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm25769-201ENSMUST00000158569 127 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm24634-201ENSMUST00000158672 107 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm42988-201ENSMUST00000198116 225 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Snord61-201ENSMUST00000083176 71 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Mir186-201ENSMUST00000083497 71 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Mir490-201ENSMUST00000093567 84 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.69□□□□□ -2.3
Col5a1O88207 Mir1298-201ENSMUST00000116681 98 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm14039-201ENSMUST00000118705 101 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm16265-201ENSMUST00000134558 108 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm23419-201ENSMUST00000175523 84 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm44921-201ENSMUST00000205290 301 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Snord89-201ENSMUST00000104516 110 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm22850-201ENSMUST00000157714 82 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Traj60-201ENSMUST00000167781 54 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Mir5104-201ENSMUST00000175319 94 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm25949-201ENSMUST00000175333 114 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Col5a1O88207 Gm37116-201ENSMUST00000195161 147 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm20734-201ENSMUST00000216939 193 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Gm22743-201ENSMUST00000083445 133 ntBASIC0.68□□□□□ -2.3
Col5a1O88207 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Col5a1O88207 Gm26074-201ENSMUST00000104063 129 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm13345-201ENSMUST00000121928 228 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm26415-201ENSMUST00000157673 292 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm22387-201ENSMUST00000158191 131 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm16399-201ENSMUST00000181423 219 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Mir3969-201ENSMUST00000197106 92 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm43749-201ENSMUST00000199345 352 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm24208-201ENSMUST00000082783 135 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Gm26326-201ENSMUST00000083070 129 ntBASIC0.67□□□□□ -2.3
Col5a1O88207 Mir544-201ENSMUST00000103813 78 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm23320-201ENSMUST00000104462 127 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm22477-201ENSMUST00000122569 316 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm25423-201ENSMUST00000157609 107 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm23996-201ENSMUST00000158062 131 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm27934-201ENSMUST00000158795 63 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.66□□□□□ -2.3
Col5a1O88207 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Mir6389-201ENSMUST00000183661 102 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm27977-201ENSMUST00000185159 111 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm29613-201ENSMUST00000185846 313 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm29544-201ENSMUST00000188860 313 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm28808-201ENSMUST00000190978 313 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm42719-201ENSMUST00000197393 355 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm44338-201ENSMUST00000198614 110 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 AC150901.1-201ENSMUST00000208407 145 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm25697-201ENSMUST00000082902 98 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm23245-201ENSMUST00000083370 135 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm24131-201ENSMUST00000158539 107 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm25750-201ENSMUST00000175483 112 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm27517-201ENSMUST00000184347 236 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm26123-201ENSMUST00000083363 135 ntBASIC0.66□□□□□ -2.3
Col5a1O88207 Gm24793-201ENSMUST00000104289 132 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Mir880-201ENSMUST00000104809 78 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Gm23990-201ENSMUST00000117031 117 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Gm25558-201ENSMUST00000158083 106 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Gm26213-201ENSMUST00000158582 110 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Col5a1O88207 Gm44976-201ENSMUST00000205543 261 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Mir34a-201ENSMUST00000083559 102 ntBASIC0.65□□□□□ -2.31
Col5a1O88207 Gm24777-201ENSMUST00000157644 107 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm25885-201ENSMUST00000157779 109 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm22946-201ENSMUST00000158558 82 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Gm22944-201ENSMUST00000158662 133 ntBASIC0.64□□□□□ -2.31
Col5a1O88207 Mir1966-201ENSMUST00000158807 108 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms