Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Gm27624-201ENSMUST00000185047 177 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-0.98□□□□□ -2.57
Abca4O35600 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
Abca4O35600 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Gm10177-202ENSMUST00000161698 207 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Gm18291-201ENSMUST00000190791 301 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Platr25-208ENSMUST00000222602 939 ntBASIC-0.98□□□□□ -2.57
Abca4O35600 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Gm26203-201ENSMUST00000082911 114 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
Abca4O35600 Gm24306-201ENSMUST00000180229 79 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Gm38019-201ENSMUST00000195133 380 ntBASIC-0.99□□□□□ -2.57
Abca4O35600 Scarna9-201ENSMUST00000104318 70 ntBASIC-1□□□□□ -2.57
Abca4O35600 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm43884-201ENSMUST00000204251 559 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm26202-201ENSMUST00000082910 65 ntBASIC-1□□□□□ -2.57
Abca4O35600 Snord67-201ENSMUST00000104033 111 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm26076-201ENSMUST00000104065 105 ntBASIC-1□□□□□ -2.57
Abca4O35600 Mir6369-201ENSMUST00000183772 106 ntBASIC-1□□□□□ -2.57
Abca4O35600 Mir7657-201ENSMUST00000196051 57 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm42622-201ENSMUST00000197229 355 ntBASIC-1□□□□□ -2.57
Abca4O35600 Mir691-201ENSMUST00000199719 78 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm44057-201ENSMUST00000204547 96 ntBASIC-1□□□□□ -2.57
Abca4O35600 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1□□□□□ -2.57
Abca4O35600 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Gm23101-201ENSMUST00000157550 137 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Gm13922-201ENSMUST00000119505 156 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Gm22815-201ENSMUST00000157451 62 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Gm17054-201ENSMUST00000169811 259 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Mir6336-201ENSMUST00000183581 130 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.01□□□□□ -2.57
Abca4O35600 Gm15002-201ENSMUST00000118406 452 ntBASIC-1.02□□□□□ -2.57
Abca4O35600 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.02□□□□□ -2.57
Abca4O35600 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.02□□□□□ -2.57
Abca4O35600 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.02□□□□□ -2.57
Abca4O35600 Gm11834-201ENSMUST00000122257 585 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm44811-201ENSMUST00000209120 228 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Abca4O35600 Gm24164-201ENSMUST00000093663 104 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.03□□□□□ -2.57
Abca4O35600 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm25486-201ENSMUST00000158726 63 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm28767-201ENSMUST00000188601 114 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm6369-201ENSMUST00000069626 412 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.03□□□□□ -2.57
Abca4O35600 Gm11936-201ENSMUST00000118323 160 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC-1.04□□□□□ -2.58
Abca4O35600 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC-1.04□□□□□ -2.58
Abca4O35600 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-1.04□□□□□ -2.58
Abca4O35600 Gm24440-201ENSMUST00000157236 63 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm24512-201ENSMUST00000174963 65 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm24818-201ENSMUST00000175093 161 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm28766-201ENSMUST00000191086 234 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.04□□□□□ -2.58
Abca4O35600 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
Abca4O35600 Mir701-201ENSMUST00000102208 109 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Mir743b-201ENSMUST00000104751 77 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Mir759-201ENSMUST00000103254 98 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.05□□□□□ -2.58
Abca4O35600 Gm23770-201ENSMUST00000178009 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm22832-201ENSMUST00000178022 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm23863-201ENSMUST00000178265 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm24828-201ENSMUST00000178507 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm23052-201ENSMUST00000178633 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm25729-201ENSMUST00000179050 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm25359-201ENSMUST00000179315 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm22624-201ENSMUST00000179913 108 ntBASIC-1.05□□□□□ -2.58
Abca4O35600 Gm25538-201ENSMUST00000101943 107 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-1.06□□□□□ -2.58
Abca4O35600 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Mir669k-201ENSMUST00000177742 127 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Gm24488-201ENSMUST00000179934 127 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Gm25673-201ENSMUST00000179957 127 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Gm25701-201ENSMUST00000179988 127 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Gm26431-201ENSMUST00000180199 127 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 AC098718.2-201ENSMUST00000226822 285 ntBASIC-1.06□□□□□ -2.58
Abca4O35600 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
Abca4O35600 Gm23981-201ENSMUST00000157136 106 ntBASIC-1.07□□□□□ -2.58
Abca4O35600 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.07□□□□□ -2.58
Abca4O35600 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.07□□□□□ -2.58
Abca4O35600 Gm27672-201ENSMUST00000183751 204 ntBASIC-1.07□□□□□ -2.58
Abca4O35600 Gm25078-201ENSMUST00000082530 107 ntBASIC-1.07□□□□□ -2.58
Abca4O35600 Gm22999-201ENSMUST00000157082 88 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms