Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm8508-201ENSMUST00000061226 363 ntBASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Gm24616-201ENSMUST00000083274 139 ntBASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Mir9-2-201ENSMUST00000083490 72 ntBASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Snord35a-201ENSMUST00000083884 90 ntBASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Trav13d-3J3QMG8 Mir547-201ENSMUST00000102051 78 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Gm24374-201ENSMUST00000104394 106 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Gm22946-201ENSMUST00000158558 82 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Gm16307-201ENSMUST00000161269 210 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Mir8119-201ENSMUST00000183371 129 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Mir488-201ENSMUST00000093595 109 ntBASIC0.85□□□□□ -2.27
Trav13d-3J3QMG8 Gm21940-201ENSMUST00000204940 2278 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm24431-201ENSMUST00000104073 66 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm24250-201ENSMUST00000157320 135 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm16546-201ENSMUST00000159442 355 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm23770-201ENSMUST00000178009 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm22832-201ENSMUST00000178022 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm23863-201ENSMUST00000178265 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm24828-201ENSMUST00000178507 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm23052-201ENSMUST00000178633 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm25729-201ENSMUST00000179050 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm25359-201ENSMUST00000179315 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm22624-201ENSMUST00000179913 108 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm20118-201ENSMUST00000187207 162 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Mir7116-201ENSMUST00000195956 70 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Gm44922-201ENSMUST00000206690 90 ntBASIC0.84□□□□□ -2.27
Trav13d-3J3QMG8 Mir466h-201ENSMUST00000104748 81 ntBASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Gm24942-201ENSMUST00000158328 114 ntBASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Mir6380-201ENSMUST00000184334 81 ntBASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Gm24457-201ENSMUST00000083196 105 ntBASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav13d-3J3QMG8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm23893-201ENSMUST00000158106 134 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm24154-201ENSMUST00000175261 130 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm22801-201ENSMUST00000175624 84 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Gm23864-201ENSMUST00000177607 107 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Mir411-201ENSMUST00000083543 82 ntBASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav13d-3J3QMG8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm24232-201ENSMUST00000104314 132 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm24238-201ENSMUST00000157792 98 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm43911-201ENSMUST00000203097 76 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.81□□□□□ -2.28
Trav13d-3J3QMG8 Gm25968-201ENSMUST00000157167 100 ntBASIC0.8□□□□□ -2.28
Trav13d-3J3QMG8 Gm23760-201ENSMUST00000158350 116 ntBASIC0.8□□□□□ -2.28
Trav13d-3J3QMG8 Mir6377-201ENSMUST00000183760 114 ntBASIC0.8□□□□□ -2.28
Trav13d-3J3QMG8 Snord47-201ENSMUST00000083034 77 ntBASIC0.8□□□□□ -2.28
Trav13d-3J3QMG8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.8□□□□□ -2.28
Trav13d-3J3QMG8 Mir1298-201ENSMUST00000116681 98 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Gm25316-201ENSMUST00000116826 118 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Gm24777-201ENSMUST00000157644 107 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Mir7009-201ENSMUST00000184519 64 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Gm23377-201ENSMUST00000082943 126 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Mir196b-201ENSMUST00000083509 85 ntBASIC0.79□□□□□ -2.28
Trav13d-3J3QMG8 Gm23329-201ENSMUST00000157415 108 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm26403-201ENSMUST00000158500 105 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm26097-201ENSMUST00000179642 93 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm24020-201ENSMUST00000180156 108 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm27974-201ENSMUST00000183415 105 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm5002-201ENSMUST00000207145 223 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.78□□□□□ -2.28
Trav13d-3J3QMG8 Gm22079-201ENSMUST00000157592 106 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Gm22967-201ENSMUST00000157956 239 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Gm16550-201ENSMUST00000162550 126 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Mir7059-201ENSMUST00000184825 59 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Gm27587-201ENSMUST00000185116 163 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Mir6928-201ENSMUST00000185166 70 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Gm42623-201ENSMUST00000197225 379 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.77□□□□□ -2.29
Trav13d-3J3QMG8 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm23838-201ENSMUST00000158067 162 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm22348-201ENSMUST00000178674 79 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm23714-201ENSMUST00000179259 105 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm7258-201ENSMUST00000179317 300 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.76□□□□□ -2.29
Trav13d-3J3QMG8 Gm8219-201ENSMUST00000218309 242 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms