Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm42795-201ENSMUST00000198847 76 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Mir30d-201ENSMUST00000083503 82 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm25485-201ENSMUST00000104120 132 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm23889-201ENSMUST00000122689 104 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm24075-201ENSMUST00000158175 72 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm20391-201ENSMUST00000174722 106 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Mir8090-201ENSMUST00000185078 136 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm22884-201ENSMUST00000083127 140 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Gm24412-201ENSMUST00000083426 109 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Mir151-201ENSMUST00000083678 68 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Pcdh1F7BJK1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm22666-201ENSMUST00000158717 164 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Traj61-201ENSMUST00000165025 72 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm23813-201ENSMUST00000175153 77 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Mir6419-201ENSMUST00000184784 113 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm22950-201ENSMUST00000082776 107 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm22251-201ENSMUST00000083216 107 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Mir127-201ENSMUST00000093568 70 ntBASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Pcdh1F7BJK1 Gm16265-201ENSMUST00000134558 108 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Gm24649-201ENSMUST00000157106 134 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Gm25887-201ENSMUST00000157777 84 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Gm23208-201ENSMUST00000158666 127 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Mir5118-201ENSMUST00000175551 67 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.94□□□□□ -2.1
Pcdh1F7BJK1 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Gm25460-201ENSMUST00000157954 127 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Gm24366-201ENSMUST00000175383 86 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Gm27369-201ENSMUST00000185182 71 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Mir6925-201ENSMUST00000197857 70 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Gm23038-201ENSMUST00000083873 104 ntBASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Pcdh1F7BJK1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm25611-201ENSMUST00000104017 133 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm25680-201ENSMUST00000116917 126 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm22635-201ENSMUST00000116962 126 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm22319-201ENSMUST00000157147 122 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Mir6379-201ENSMUST00000183392 115 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm25402-201ENSMUST00000082966 131 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Mir107-201ENSMUST00000083660 87 ntBASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Pcdh1F7BJK1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.91□□□□□ -2.1
Pcdh1F7BJK1 Gm44807-201ENSMUST00000206115 154 ntBASIC1.91□□□□□ -2.1
Pcdh1F7BJK1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.91□□□□□ -2.1
Pcdh1F7BJK1 Gm25610-201ENSMUST00000104016 129 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm26342-201ENSMUST00000104557 129 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm26253-201ENSMUST00000122493 103 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm23384-201ENSMUST00000158593 103 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm25241-201ENSMUST00000174909 84 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm26217-201ENSMUST00000175212 84 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Mir3083-201ENSMUST00000175377 64 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Snord87-201ENSMUST00000175437 87 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm26123-201ENSMUST00000083363 135 ntBASIC1.9□□□□□ -2.11
Pcdh1F7BJK1 Gm23469-201ENSMUST00000157131 104 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Gm22425-201ENSMUST00000158532 138 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Mir378a-201ENSMUST00000198300 66 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Gm24099-201ENSMUST00000083384 107 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Mir221-201ENSMUST00000083488 95 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Gm24523-201ENSMUST00000083965 132 ntBASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Pcdh1F7BJK1 Gm26015-201ENSMUST00000104402 125 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm23652-201ENSMUST00000116752 107 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm24274-201ENSMUST00000116787 124 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 n-R5s39-201ENSMUST00000122613 108 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm25113-201ENSMUST00000157185 143 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm26104-201ENSMUST00000157250 108 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm22227-201ENSMUST00000157356 259 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm22815-201ENSMUST00000157451 62 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm25949-201ENSMUST00000175333 114 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm23375-201ENSMUST00000175407 83 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Gm27722-201ENSMUST00000183908 76 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Mir7016-201ENSMUST00000184308 72 ntBASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Pcdh1F7BJK1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm22494-201ENSMUST00000104495 128 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm25529-201ENSMUST00000104850 92 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm23817-201ENSMUST00000158449 104 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm24770-201ENSMUST00000158505 92 ntBASIC1.87□□□□□ -2.11
Pcdh1F7BJK1 Gm24880-201ENSMUST00000158776 85 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 189.5 ms