Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm23473-201ENSMUST00000158883 116 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm24818-201ENSMUST00000175093 161 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm25451-201ENSMUST00000177832 121 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Mir6382-201ENSMUST00000184055 110 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm10193-201ENSMUST00000188288 231 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Gm5010-201ENSMUST00000213131 260 ntBASIC-0.42□□□□□ -2.48
Col6a5A6H584 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
Col6a5A6H584 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm22656-201ENSMUST00000104199 171 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm25464-201ENSMUST00000175481 107 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm28700-201ENSMUST00000187614 579 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm22571-201ENSMUST00000082984 70 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm24536-201ENSMUST00000083144 107 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm22828-201ENSMUST00000083768 107 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm24582-201ENSMUST00000103967 103 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm26425-201ENSMUST00000122529 82 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm23169-201ENSMUST00000157157 112 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm22883-201ENSMUST00000157376 106 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm22252-201ENSMUST00000179316 79 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Mir6336-201ENSMUST00000183581 130 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Gm44282-201ENSMUST00000203199 190 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 AL645546.2-201ENSMUST00000224526 265 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.43□□□□□ -2.48
Col6a5A6H584 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm14126-201ENSMUST00000122345 395 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm43114-201ENSMUST00000198298 343 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm25588-201ENSMUST00000082501 140 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm22972-201ENSMUST00000083297 131 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm6952-201ENSMUST00000118629 159 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm24726-201ENSMUST00000158232 121 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm25284-201ENSMUST00000180345 141 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Col6a5A6H584 Mir496b-201ENSMUST00000184935 113 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 AC168880.2-201ENSMUST00000224488 201 ntBASIC-0.44□□□□□ -2.48
Col6a5A6H584 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm24198-201ENSMUST00000157812 108 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm24192-201ENSMUST00000157978 145 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm45005-201ENSMUST00000206640 157 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 AC132104.1-201ENSMUST00000213615 260 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm25078-201ENSMUST00000082530 107 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm25810-201ENSMUST00000082752 108 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Mir709-201ENSMUST00000102190 88 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Snord67-201ENSMUST00000104033 111 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Mir466f-3-201ENSMUST00000104788 94 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm14536-201ENSMUST00000118324 138 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm25884-201ENSMUST00000157782 62 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm25449-201ENSMUST00000179389 79 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm26189-201ENSMUST00000179879 107 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm23730-201ENSMUST00000083236 107 ntBASIC-0.45□□□□□ -2.48
Col6a5A6H584 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm25054-201ENSMUST00000157370 97 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm25185-201ENSMUST00000157754 96 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm44300-201ENSMUST00000196792 121 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm45232-201ENSMUST00000207811 162 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.46□□□□□ -2.48
Col6a5A6H584 Gm24966-201ENSMUST00000082443 79 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms