Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm13922-201ENSMUST00000119505 156 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm23759-201ENSMUST00000158351 268 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm23523-201ENSMUST00000180190 107 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm28926-201ENSMUST00000191063 680 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm37438-201ENSMUST00000192813 393 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 AC156790.3-201ENSMUST00000226200 254 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm23423-201ENSMUST00000082782 106 ntBASIC-1.72□□□□□ -2.68
Trav4-3A0A0B4J1K1 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm22113-201ENSMUST00000158343 104 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm26271-201ENSMUST00000158349 104 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Snord8-201ENSMUST00000175303 110 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 n-R5s96-201ENSMUST00000082574 124 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.73□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm22321-201ENSMUST00000157152 104 ntBASIC-1.74□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.74□□□□□ -2.69
Trav4-3A0A0B4J1K1 CT009718.4-201ENSMUST00000221881 109 ntBASIC-1.74□□□□□ -2.69
Trav4-3A0A0B4J1K1 CT009550.5-201ENSMUST00000226286 382 ntBASIC-1.74□□□□□ -2.69
Trav4-3A0A0B4J1K1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm22883-201ENSMUST00000157376 106 ntBASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm25434-201ENSMUST00000158278 167 ntBASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 AC120394.1-201ENSMUST00000217153 351 ntBASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.75□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm26421-201ENSMUST00000104279 132 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm14766-201ENSMUST00000121689 367 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm23411-201ENSMUST00000157988 62 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm24577-201ENSMUST00000158580 63 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm24487-201ENSMUST00000178017 63 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Mir8116-201ENSMUST00000184134 97 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm18291-201ENSMUST00000190791 301 ntBASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-1.76□□□□□ -2.69
Trav4-3A0A0B4J1K1 Mir20b-201ENSMUST00000102087 80 ntBASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm25781-201ENSMUST00000122527 84 ntBASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 mt-Tw-201ENSMUST00000082397 67 ntBASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm25930-201ENSMUST00000082785 107 ntBASIC-1.77□□□□□ -2.69
Trav4-3A0A0B4J1K1 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.78□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.78□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm5002-201ENSMUST00000207145 223 ntBASIC-1.78□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.78□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm10780-201ENSMUST00000099459 285 ntBASIC-1.78□□□□□ -2.69
Trav4-3A0A0B4J1K1 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25366-201ENSMUST00000158845 124 ntBASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25993-201ENSMUST00000175391 80 ntBASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm22575-201ENSMUST00000082981 110 ntBASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.79□□□□□ -2.7
Trav4-3A0A0B4J1K1 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm26143-201ENSMUST00000104480 108 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25317-201ENSMUST00000116824 129 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm24640-201ENSMUST00000116949 126 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm22626-201ENSMUST00000116990 126 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm22788-201ENSMUST00000157876 61 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm24754-201ENSMUST00000177997 107 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir6346-201ENSMUST00000183982 81 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Trav5-2-201ENSMUST00000199855 280 ntBASIC-1.8□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm23654-201ENSMUST00000116758 126 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25108-201ENSMUST00000122473 78 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm27297-201ENSMUST00000183395 105 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.81□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm24377-201ENSMUST00000104398 131 ntBASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25588-201ENSMUST00000082501 140 ntBASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir302d-201ENSMUST00000083513 66 ntBASIC-1.82□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir717-201ENSMUST00000102259 109 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm12785-201ENSMUST00000122052 172 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm24847-201ENSMUST00000158032 108 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25337-201ENSMUST00000083723 104 ntBASIC-1.83□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.84□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm25055-201ENSMUST00000157369 76 ntBASIC-1.84□□□□□ -2.7
Trav4-3A0A0B4J1K1 Gm28330-201ENSMUST00000190353 171 ntBASIC-1.84□□□□□ -2.7
Trav4-3A0A0B4J1K1 Snord98-201ENSMUST00000116819 65 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm23655-201ENSMUST00000122627 105 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm22720-201ENSMUST00000122710 87 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm22186-201ENSMUST00000157822 122 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm24223-201ENSMUST00000158827 90 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm25801-201ENSMUST00000082638 106 ntBASIC-1.85□□□□□ -2.71
Trav4-3A0A0B4J1K1 Gm22294-201ENSMUST00000083308 104 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms