Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm25509-201ENSMUST00000116985 106 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm25323-201ENSMUST00000122555 103 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm26026-201ENSMUST00000122726 123 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm27905-201ENSMUST00000184005 207 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm44464-201ENSMUST00000198010 138 ntBASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
Upk3aQ9JKX8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Gm14883-201ENSMUST00000120179 157 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Gm25828-201ENSMUST00000157087 95 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Gm25720-201ENSMUST00000157503 105 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.5□□□□□ -2.33
Upk3aQ9JKX8 Rny1-201ENSMUST00000083767 112 ntBASIC0.49□□□□□ -2.33
Upk3aQ9JKX8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Mir881-201ENSMUST00000104844 78 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm26274-201ENSMUST00000157103 321 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm23763-201ENSMUST00000158345 60 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm25362-201ENSMUST00000158854 105 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm27585-201ENSMUST00000183717 199 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Mir6377-201ENSMUST00000183760 114 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Mir500-201ENSMUST00000093600 92 ntBASIC0.48□□□□□ -2.33
Upk3aQ9JKX8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Gm25882-201ENSMUST00000157784 85 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Mir344-201ENSMUST00000083634 95 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Mir146-201ENSMUST00000083667 65 ntBASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Upk3aQ9JKX8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.46□□□□□ -2.34
Upk3aQ9JKX8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.46□□□□□ -2.34
Upk3aQ9JKX8 Mir219b-201ENSMUST00000198317 65 ntBASIC0.46□□□□□ -2.34
Upk3aQ9JKX8 Mir384-201ENSMUST00000083565 88 ntBASIC0.46□□□□□ -2.34
Upk3aQ9JKX8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm25771-201ENSMUST00000158565 144 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm25397-201ENSMUST00000176951 92 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm27672-201ENSMUST00000183751 204 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm24929-201ENSMUST00000083403 139 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.45□□□□□ -2.34
Upk3aQ9JKX8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm24342-201ENSMUST00000103907 104 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm22149-201ENSMUST00000104442 136 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm28020-201ENSMUST00000157739 67 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm25241-201ENSMUST00000174909 84 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm26217-201ENSMUST00000175212 84 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm6003-201ENSMUST00000187903 463 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm45859-201ENSMUST00000212794 214 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.44□□□□□ -2.34
Upk3aQ9JKX8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Gm25267-201ENSMUST00000158522 63 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Gm26123-201ENSMUST00000083363 135 ntBASIC0.43□□□□□ -2.34
Upk3aQ9JKX8 Gm14567-201ENSMUST00000117155 174 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm12815-201ENSMUST00000121737 135 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm16546-201ENSMUST00000159442 355 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Gm26326-201ENSMUST00000083070 129 ntBASIC0.42□□□□□ -2.34
Upk3aQ9JKX8 Snord100-201ENSMUST00000116836 74 ntBASIC0.41□□□□□ -2.34
Upk3aQ9JKX8 Gm22101-201ENSMUST00000157928 103 ntBASIC0.41□□□□□ -2.34
Upk3aQ9JKX8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.41□□□□□ -2.34
Upk3aQ9JKX8 Gm19790-201ENSMUST00000214414 251 ntBASIC0.41□□□□□ -2.34
Upk3aQ9JKX8 Gm26076-201ENSMUST00000104065 105 ntBASIC0.4□□□□□ -2.35
Upk3aQ9JKX8 Gm14946-201ENSMUST00000119859 296 ntBASIC0.4□□□□□ -2.35
Upk3aQ9JKX8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.4□□□□□ -2.35
Upk3aQ9JKX8 Gm22999-201ENSMUST00000157082 88 ntBASIC0.4□□□□□ -2.35
Upk3aQ9JKX8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.4□□□□□ -2.35
Upk3aQ9JKX8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms