Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.4□□□□□ -2.35
Lmx1aQ9JKU8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Mir709-201ENSMUST00000102190 88 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Mir875-201ENSMUST00000104698 78 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm14792-201ENSMUST00000119725 258 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm13797-201ENSMUST00000121792 120 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm26274-201ENSMUST00000157103 321 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm44055-201ENSMUST00000204376 247 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.39□□□□□ -2.35
Lmx1aQ9JKU8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm25828-201ENSMUST00000157087 95 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm24015-201ENSMUST00000157725 232 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm23219-201ENSMUST00000158123 87 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm23581-201ENSMUST00000158531 63 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm25718-201ENSMUST00000158632 118 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm24634-201ENSMUST00000158672 107 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm25235-201ENSMUST00000179933 107 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm45673-201ENSMUST00000210293 358 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm45471-201ENSMUST00000211270 281 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Lmx1aQ9JKU8 Mir710-201ENSMUST00000102088 110 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm13339-201ENSMUST00000120651 510 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm22434-201ENSMUST00000158549 122 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Mir6951-201ENSMUST00000183910 75 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm44373-201ENSMUST00000196112 169 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm24764-201ENSMUST00000083686 199 ntBASIC0.37□□□□□ -2.35
Lmx1aQ9JKU8 Gm22048-201ENSMUST00000104721 89 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Mir669i-201ENSMUST00000117007 127 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm15069-201ENSMUST00000117792 192 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm15068-201ENSMUST00000119796 192 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm14946-201ENSMUST00000119859 296 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm24559-201ENSMUST00000157519 121 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 AL603630.1-201ENSMUST00000214781 147 ntBASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
Lmx1aQ9JKU8 Gm25111-201ENSMUST00000116686 147 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm11204-201ENSMUST00000122438 147 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm26402-201ENSMUST00000158499 113 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm23579-201ENSMUST00000158528 103 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm22801-201ENSMUST00000175624 84 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm27747-201ENSMUST00000184707 85 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.35□□□□□ -2.35
Lmx1aQ9JKU8 Gm12837-201ENSMUST00000120131 373 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm25323-201ENSMUST00000122555 103 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm24635-201ENSMUST00000122712 128 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm23466-201ENSMUST00000157133 106 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm22767-201ENSMUST00000158365 165 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm24006-201ENSMUST00000158462 132 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Lmx1aQ9JKU8 Snord69-201ENSMUST00000104024 80 ntBASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm22051-201ENSMUST00000117002 127 ntBASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm12771-201ENSMUST00000120246 135 ntBASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm24724-201ENSMUST00000158230 107 ntBASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm25935-201ENSMUST00000178746 107 ntBASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.33□□□□□ -2.36
Lmx1aQ9JKU8 Gm11322-201ENSMUST00000118095 435 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Gm13922-201ENSMUST00000119505 156 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Gm25885-201ENSMUST00000157779 109 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Gm22686-201ENSMUST00000082847 100 ntBASIC0.32□□□□□ -2.36
Lmx1aQ9JKU8 Mir547-201ENSMUST00000102051 78 ntBASIC0.31□□□□□ -2.36
Lmx1aQ9JKU8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.31□□□□□ -2.36
Lmx1aQ9JKU8 Gm25241-201ENSMUST00000174909 84 ntBASIC0.31□□□□□ -2.36
Lmx1aQ9JKU8 Gm26217-201ENSMUST00000175212 84 ntBASIC0.31□□□□□ -2.36
Lmx1aQ9JKU8 Mir6336-201ENSMUST00000183581 130 ntBASIC0.31□□□□□ -2.36
Lmx1aQ9JKU8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms