Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mir802-201ENSMUST00000103258 97 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Mir466l-201ENSMUST00000104866 121 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Gm25539-201ENSMUST00000116886 122 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Gm11248-201ENSMUST00000119568 201 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Gm23668-201ENSMUST00000157465 111 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Mir21c-201ENSMUST00000184910 78 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 AC122327.1-201ENSMUST00000220778 108 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Gm26123-201ENSMUST00000083363 135 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.44□□□□□ -2.02
Trim39Q9ESN2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Gm14882-201ENSMUST00000117216 218 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Gm23601-201ENSMUST00000157259 131 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Gm23268-201ENSMUST00000175494 78 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.43□□□□□ -2.02
Trim39Q9ESN2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm25750-201ENSMUST00000175483 112 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm44462-201ENSMUST00000199696 129 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm34314-201ENSMUST00000203622 367 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm25788-201ENSMUST00000082721 131 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trim39Q9ESN2 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trim39Q9ESN2 Gm23261-201ENSMUST00000158316 136 ntBASIC2.41□□□□□ -2.02
Trim39Q9ESN2 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.41□□□□□ -2.02
Trim39Q9ESN2 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.41□□□□□ -2.02
Trim39Q9ESN2 Mir423-201ENSMUST00000083584 109 ntBASIC2.41□□□□□ -2.02
Trim39Q9ESN2 Gm23128-201ENSMUST00000104257 132 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm16021-201ENSMUST00000121176 219 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm25370-201ENSMUST00000158159 94 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm26215-201ENSMUST00000158584 139 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm23128-202ENSMUST00000196578 133 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm22154-201ENSMUST00000083844 131 ntBASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trim39Q9ESN2 Gm25329-201ENSMUST00000158041 126 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Gm26213-201ENSMUST00000158582 110 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Gm25528-201ENSMUST00000180264 132 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Mir7k-201ENSMUST00000184115 110 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Gm3724-201ENSMUST00000197957 349 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Gm22249-201ENSMUST00000082485 136 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Mir193a-201ENSMUST00000083461 66 ntBASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trim39Q9ESN2 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm25611-201ENSMUST00000104017 133 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm24291-201ENSMUST00000157633 162 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm22503-201ENSMUST00000158983 115 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm16550-201ENSMUST00000162550 126 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm20391-201ENSMUST00000174722 106 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm25241-201ENSMUST00000174909 84 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm26217-201ENSMUST00000175212 84 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Gm25449-201ENSMUST00000179389 79 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Trbv25-201ENSMUST00000194700 273 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Snord80-201ENSMUST00000083801 81 ntBASIC2.38□□□□□ -2.03
Trim39Q9ESN2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm23996-201ENSMUST00000158062 131 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm22425-201ENSMUST00000158532 138 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm24880-201ENSMUST00000158776 85 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm44393-201ENSMUST00000197418 138 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm42935-201ENSMUST00000202004 151 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm22866-201ENSMUST00000083947 177 ntBASIC2.37□□□□□ -2.03
Trim39Q9ESN2 Gm23838-201ENSMUST00000158067 162 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm25011-201ENSMUST00000158398 126 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Mir6379-201ENSMUST00000183392 115 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm37807-201ENSMUST00000194310 190 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm43722-201ENSMUST00000196054 124 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm43626-201ENSMUST00000198575 162 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trim39Q9ESN2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm23747-201ENSMUST00000104228 131 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm24627-201ENSMUST00000122764 138 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm23065-201ENSMUST00000158236 130 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Mir3086-201ENSMUST00000175072 87 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm23375-201ENSMUST00000175407 83 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Gm25337-201ENSMUST00000083723 104 ntBASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trim39Q9ESN2 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Gm25485-201ENSMUST00000104120 132 ntBASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Gm23175-201ENSMUST00000104371 132 ntBASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Gm24958-201ENSMUST00000158009 97 ntBASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Mir3965-201ENSMUST00000175570 69 ntBASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Gm27505-201ENSMUST00000185071 110 ntBASIC2.34□□□□□ -2.03
Trim39Q9ESN2 Gm22884-201ENSMUST00000083127 140 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 204.7 ms