Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.25□□□□□ -2.05
Nkx6-1Q99MA9 Gm27979-201ENSMUST00000185126 56 ntBASIC2.25□□□□□ -2.05
Nkx6-1Q99MA9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.25□□□□□ -2.05
Nkx6-1Q99MA9 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Nkx6-1Q99MA9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Gm22451-201ENSMUST00000122803 151 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Gm23033-201ENSMUST00000157996 134 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Gm22055-201ENSMUST00000083388 107 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Mir151-201ENSMUST00000083678 68 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Gm22866-201ENSMUST00000083947 177 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Snora2b-201ENSMUST00000084005 137 ntBASIC2.24□□□□□ -2.05
Nkx6-1Q99MA9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm25094-201ENSMUST00000103992 131 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Mir880-201ENSMUST00000104809 78 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm12309-201ENSMUST00000119889 182 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm12013-201ENSMUST00000121971 155 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm8034-201ENSMUST00000178853 132 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm37330-201ENSMUST00000192606 153 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Mir93-201ENSMUST00000083593 88 ntBASIC2.23□□□□□ -2.05
Nkx6-1Q99MA9 Gm23010-201ENSMUST00000104151 126 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Snora36b-201ENSMUST00000104383 132 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Gm22196-201ENSMUST00000116865 109 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Gm11856-201ENSMUST00000118712 276 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Gm22999-201ENSMUST00000157082 88 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Gm22490-201ENSMUST00000157188 119 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Gm22332-201ENSMUST00000158072 126 ntBASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Nkx6-1Q99MA9 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.05
Nkx6-1Q99MA9 Gm6444-201ENSMUST00000119611 458 ntBASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 Gm25994-201ENSMUST00000175392 101 ntBASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 Gm45471-201ENSMUST00000211270 281 ntBASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Nkx6-1Q99MA9 Mir1949-201ENSMUST00000157434 141 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 Gm23289-201ENSMUST00000175615 108 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 Mir6419-201ENSMUST00000184784 113 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.2□□□□□ -2.06
Nkx6-1Q99MA9 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Gm26076-201ENSMUST00000104065 105 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Mir6377-201ENSMUST00000183760 114 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Gm43324-201ENSMUST00000197482 289 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Snord104-201ENSMUST00000083192 70 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Gm24412-201ENSMUST00000083426 109 ntBASIC2.19□□□□□ -2.06
Nkx6-1Q99MA9 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm26090-201ENSMUST00000157897 128 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm25750-201ENSMUST00000175483 112 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Gm44408-201ENSMUST00000200205 66 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Mir410-201ENSMUST00000083563 81 ntBASIC2.18□□□□□ -2.06
Nkx6-1Q99MA9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Gm11792-201ENSMUST00000120640 168 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Mir7225-201ENSMUST00000184178 54 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Mir411-201ENSMUST00000083543 82 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Mir423-201ENSMUST00000083584 109 ntBASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
Nkx6-1Q99MA9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm22004-201ENSMUST00000101884 107 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm24907-201ENSMUST00000116932 128 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm24913-201ENSMUST00000157286 107 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm24238-201ENSMUST00000157792 98 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm20409-201ENSMUST00000173457 130 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Gm25069-201ENSMUST00000175238 86 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Snord87-201ENSMUST00000175437 87 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.16□□□□□ -2.06
Nkx6-1Q99MA9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm23083-201ENSMUST00000157851 116 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm26213-201ENSMUST00000158582 110 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm25678-201ENSMUST00000174984 73 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm26498-201ENSMUST00000177799 79 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm26230-201ENSMUST00000180141 79 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm45429-201ENSMUST00000209527 172 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Gm45268-201ENSMUST00000210046 370 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.15□□□□□ -2.07
Nkx6-1Q99MA9 Mir107-201ENSMUST00000083660 87 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 160 ms