Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm23043-201ENSMUST00000157890 109 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Snord87-201ENSMUST00000175437 87 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm37377-201ENSMUST00000191733 304 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc9Q8VC31 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm14567-201ENSMUST00000117155 174 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm14568-201ENSMUST00000119321 294 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm13433-201ENSMUST00000121701 240 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm12013-201ENSMUST00000121971 155 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm25323-201ENSMUST00000122555 103 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm25544-201ENSMUST00000122676 120 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm23253-201ENSMUST00000157441 104 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm24480-201ENSMUST00000157442 103 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm20613-201ENSMUST00000175828 345 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Snord50a-201ENSMUST00000178154 72 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm24463-201ENSMUST00000178417 72 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Gm26435-201ENSMUST00000179026 107 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Mir3569-201ENSMUST00000185080 58 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Mir410-201ENSMUST00000083563 81 ntBASIC2.12□□□□□ -2.07
Ccdc9Q8VC31 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm23060-201ENSMUST00000102345 109 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm26253-201ENSMUST00000122493 103 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm25828-201ENSMUST00000157087 95 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm23665-201ENSMUST00000158054 62 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm25367-201ENSMUST00000158846 106 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm25035-201ENSMUST00000175414 77 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm44962-201ENSMUST00000206460 279 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm23377-201ENSMUST00000082943 126 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm25681-201ENSMUST00000083938 106 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.11□□□□□ -2.07
Ccdc9Q8VC31 Gm22935-201ENSMUST00000103960 104 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Gm16265-201ENSMUST00000134558 108 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Gm22803-201ENSMUST00000158049 283 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Mir6406-201ENSMUST00000183592 120 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Gm25820-201ENSMUST00000198589 127 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 CT571266.1-201ENSMUST00000222859 153 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 BC022960-201ENSMUST00000119987 1815 ntBASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc9Q8VC31 Gm22729-201ENSMUST00000158088 129 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Gm25491-201ENSMUST00000158733 308 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Mir6350-201ENSMUST00000183639 105 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Gm27672-201ENSMUST00000183751 204 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Mir7226-201ENSMUST00000184953 60 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Mir7021-201ENSMUST00000197026 63 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 Gm44921-201ENSMUST00000205290 301 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.09□□□□□ -2.07
Ccdc9Q8VC31 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.09□□□□□ -2.08
Ccdc9Q8VC31 Gm26421-201ENSMUST00000104279 132 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm22196-201ENSMUST00000116865 109 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm24896-201ENSMUST00000122741 135 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm16328-201ENSMUST00000126985 196 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm23670-201ENSMUST00000157469 119 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm23567-201ENSMUST00000178005 107 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm8034-201ENSMUST00000178853 132 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm27443-201ENSMUST00000184660 98 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm29535-201ENSMUST00000185723 109 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm28143-201ENSMUST00000191082 109 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm26126-201ENSMUST00000083188 164 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm26265-201ENSMUST00000083277 135 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Gm22827-201ENSMUST00000083766 107 ntBASIC2.08□□□□□ -2.08
Ccdc9Q8VC31 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Gm25091-201ENSMUST00000103997 71 ntBASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Gm25289-201ENSMUST00000122799 119 ntBASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Gm25678-201ENSMUST00000174984 73 ntBASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.07□□□□□ -2.08
Ccdc9Q8VC31 Mir547-201ENSMUST00000102051 78 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Gm23859-201ENSMUST00000158383 64 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Mir3083-201ENSMUST00000175377 64 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Mir6901-201ENSMUST00000185062 62 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Gm45429-201ENSMUST00000209527 172 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Gm25588-201ENSMUST00000082501 140 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Gm25636-201ENSMUST00000082666 133 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Mir340-201ENSMUST00000083483 98 ntBASIC2.06□□□□□ -2.08
Ccdc9Q8VC31 Gm22228-201ENSMUST00000157364 101 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 Gm22515-201ENSMUST00000158273 305 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 Gm24177-201ENSMUST00000158927 131 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 Gm25933-201ENSMUST00000178943 108 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 Gm26175-201ENSMUST00000083794 131 ntBASIC2.05□□□□□ -2.08
Ccdc9Q8VC31 Mir223-201ENSMUST00000102112 110 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm23950-201ENSMUST00000104026 129 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm24468-201ENSMUST00000104489 104 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm13885-201ENSMUST00000117569 187 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm22079-201ENSMUST00000157592 106 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm22963-201ENSMUST00000157960 91 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm24333-201ENSMUST00000175101 84 ntBASIC2.04□□□□□ -2.08
Ccdc9Q8VC31 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 190.1 ms