Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm26080-201ENSMUST00000104069 131 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm22387-201ENSMUST00000158191 131 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm25364-201ENSMUST00000158851 107 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Gm27792-201ENSMUST00000184031 115 ntBASIC2.01□□□□□ -2.09
Ushbp1Q8R370 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ushbp1Q8R370 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ushbp1Q8R370 Gm25035-201ENSMUST00000175414 77 ntBASIC2□□□□□ -2.09
Ushbp1Q8R370 Gm27668-201ENSMUST00000184188 120 ntBASIC2□□□□□ -2.09
Ushbp1Q8R370 AC164612.2-202ENSMUST00000216314 253 ntBASIC2□□□□□ -2.09
Ushbp1Q8R370 Mir200b-201ENSMUST00000083615 70 ntBASIC2□□□□□ -2.09
Ushbp1Q8R370 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ushbp1Q8R370 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22003-201ENSMUST00000101885 107 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Mir223-201ENSMUST00000102112 110 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm26082-201ENSMUST00000104070 127 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm16186-201ENSMUST00000120132 216 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm24783-201ENSMUST00000157639 100 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm26415-201ENSMUST00000157673 292 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm26084-201ENSMUST00000157903 104 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm23208-201ENSMUST00000158666 127 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22129-201ENSMUST00000179034 107 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm23410-201ENSMUST00000179967 107 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22756-201ENSMUST00000180118 107 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm37778-201ENSMUST00000191732 190 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm45754-201ENSMUST00000212380 279 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22505-201ENSMUST00000082956 108 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm26326-201ENSMUST00000083070 129 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22363-201ENSMUST00000083100 108 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm23814-201ENSMUST00000083230 102 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm23095-201ENSMUST00000083446 107 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm22576-201ENSMUST00000083733 104 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Mir490-201ENSMUST00000093567 84 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.99□□□□□ -2.09
Ushbp1Q8R370 Gm44489-201ENSMUST00000104619 97 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Mir873a-201ENSMUST00000104863 77 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Gm14674-201ENSMUST00000117816 342 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Gm23504-201ENSMUST00000158988 95 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Gm27517-201ENSMUST00000184347 236 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Gm22283-201ENSMUST00000082556 161 ntBASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Ushbp1Q8R370 Gm22761-201ENSMUST00000102278 96 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Gm22545-201ENSMUST00000104350 132 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Gm23859-201ENSMUST00000158383 64 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Gm38298-201ENSMUST00000193578 118 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Ushbp1Q8R370 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Gm24705-201ENSMUST00000082808 107 ntBASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Ushbp1Q8R370 Gm26091-201ENSMUST00000122704 82 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm22228-201ENSMUST00000157364 101 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm25044-201ENSMUST00000158603 104 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm24366-201ENSMUST00000175383 86 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm24572-201ENSMUST00000175505 88 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm43911-201ENSMUST00000203097 76 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 Gm45544-201ENSMUST00000211130 88 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.96□□□□□ -2.1
Ushbp1Q8R370 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm25274-201ENSMUST00000104296 135 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm25496-201ENSMUST00000104430 120 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm24000-201ENSMUST00000158063 89 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm24345-201ENSMUST00000158706 124 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm25855-201ENSMUST00000082787 72 ntBASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Ushbp1Q8R370 Gm25879-201ENSMUST00000104330 107 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Gm14568-201ENSMUST00000119321 294 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Mir3968-201ENSMUST00000175355 100 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Snord14a-201ENSMUST00000082807 87 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Gm24410-201ENSMUST00000083433 107 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Gm22743-201ENSMUST00000083445 133 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Mir448-201ENSMUST00000083516 112 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Gm23347-201ENSMUST00000083823 82 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Mir489-201ENSMUST00000093599 107 ntBASIC1.94□□□□□ -2.1
Ushbp1Q8R370 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm26420-201ENSMUST00000104273 103 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm23170-201ENSMUST00000157158 106 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm24222-201ENSMUST00000158834 93 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm26073-201ENSMUST00000179906 127 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Mir7657-201ENSMUST00000196051 57 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm24148-201ENSMUST00000082762 80 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm23509-201ENSMUST00000083080 160 ntBASIC1.93□□□□□ -2.1
Ushbp1Q8R370 Gm25170-201ENSMUST00000104191 129 ntBASIC1.92□□□□□ -2.1
Ushbp1Q8R370 Gm22888-201ENSMUST00000158640 77 ntBASIC1.92□□□□□ -2.1
Ushbp1Q8R370 Gm28794-201ENSMUST00000185276 136 ntBASIC1.92□□□□□ -2.1
Ushbp1Q8R370 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Ushbp1Q8R370 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.92□□□□□ -2.1
Ushbp1Q8R370 mt-Tt-201ENSMUST00000082422 67 ntBASIC1.92□□□□□ -2.1
Ushbp1Q8R370 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ushbp1Q8R370 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.91□□□□□ -2.1
Ushbp1Q8R370 Gm11856-201ENSMUST00000118712 276 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 204.1 ms