Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14674-201ENSMUST00000117816 342 ntBASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Gm22966-201ENSMUST00000157957 129 ntBASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Gm24345-201ENSMUST00000158706 124 ntBASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Gm23504-201ENSMUST00000158988 95 ntBASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Gm23138-201ENSMUST00000083365 103 ntBASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Vps53Q8CCB4 Gm24000-201ENSMUST00000158063 89 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Gm22386-201ENSMUST00000158192 129 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Gm25771-201ENSMUST00000158565 144 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Gm27326-201ENSMUST00000183504 95 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Mir9-2-201ENSMUST00000083490 72 ntBASIC1.88□□□□□ -2.11
Vps53Q8CCB4 Gm14626-201ENSMUST00000117619 216 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm14502-201ENSMUST00000118154 113 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm11644-201ENSMUST00000119735 150 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm25769-201ENSMUST00000158569 127 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm18433-201ENSMUST00000192747 197 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm22283-201ENSMUST00000082556 161 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm23303-201ENSMUST00000082714 152 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm23445-201ENSMUST00000082800 107 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Gm24449-201ENSMUST00000083985 106 ntBASIC1.87□□□□□ -2.11
Vps53Q8CCB4 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Vps53Q8CCB4 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Vps53Q8CCB4 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Gm24747-201ENSMUST00000157835 87 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Gm25831-201ENSMUST00000158924 163 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Mir6419-201ENSMUST00000184784 113 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Vps53Q8CCB4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Vps53Q8CCB4 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm22149-201ENSMUST00000104442 136 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm23996-201ENSMUST00000158062 131 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm23208-201ENSMUST00000158666 127 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm26073-201ENSMUST00000179906 127 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm27248-201ENSMUST00000184004 166 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Gm28383-201ENSMUST00000187563 139 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.85□□□□□ -2.11
Vps53Q8CCB4 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm26420-201ENSMUST00000104273 103 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Mir880-201ENSMUST00000104809 78 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm11334-201ENSMUST00000121969 156 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm26181-201ENSMUST00000157687 106 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm23859-201ENSMUST00000158383 64 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm43911-201ENSMUST00000203097 76 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm25855-201ENSMUST00000082787 72 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Gm26326-201ENSMUST00000083070 129 ntBASIC1.84□□□□□ -2.11
Vps53Q8CCB4 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Gm11856-201ENSMUST00000118712 276 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Gm25060-201ENSMUST00000157374 130 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Mir6351-201ENSMUST00000183826 99 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Gm43898-201ENSMUST00000204456 424 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Gm22576-201ENSMUST00000083733 104 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.83□□□□□ -2.12
Vps53Q8CCB4 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Vps53Q8CCB4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.82□□□□□ -2.12
Vps53Q8CCB4 Gm24174-201ENSMUST00000158933 111 ntBASIC1.82□□□□□ -2.12
Vps53Q8CCB4 Gm24366-201ENSMUST00000175383 86 ntBASIC1.82□□□□□ -2.12
Vps53Q8CCB4 Gm25730-201ENSMUST00000178753 165 ntBASIC1.82□□□□□ -2.12
Vps53Q8CCB4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.82□□□□□ -2.12
Vps53Q8CCB4 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Gm26011-201ENSMUST00000104410 104 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Gm23044-201ENSMUST00000157891 100 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Gm23277-201ENSMUST00000157914 136 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Gm25750-201ENSMUST00000175483 112 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Mir320-201ENSMUST00000083594 82 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 BC022960-201ENSMUST00000119987 1815 ntBASIC1.81□□□□□ -2.12
Vps53Q8CCB4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Vps53Q8CCB4 Gm27792-201ENSMUST00000184031 115 ntBASIC1.8□□□□□ -2.12
Vps53Q8CCB4 Mir7665-201ENSMUST00000184907 63 ntBASIC1.8□□□□□ -2.12
Vps53Q8CCB4 Gm22884-201ENSMUST00000083127 140 ntBASIC1.8□□□□□ -2.12
Vps53Q8CCB4 Gm23060-201ENSMUST00000102345 109 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm24586-201ENSMUST00000116695 89 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm15115-201ENSMUST00000121145 264 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm26084-201ENSMUST00000157903 104 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm26213-201ENSMUST00000158582 110 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Mir3057-201ENSMUST00000175040 91 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Gm27517-201ENSMUST00000184347 236 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Mir221-201ENSMUST00000083488 95 ntBASIC1.79□□□□□ -2.12
Vps53Q8CCB4 Mir223-201ENSMUST00000102112 110 ntBASIC1.78□□□□□ -2.12
Vps53Q8CCB4 Gm26082-201ENSMUST00000104070 127 ntBASIC1.78□□□□□ -2.12
Vps53Q8CCB4 Mir669j-201ENSMUST00000179023 121 ntBASIC1.78□□□□□ -2.12
Vps53Q8CCB4 Gm44384-201ENSMUST00000200208 114 ntBASIC1.78□□□□□ -2.12
Vps53Q8CCB4 Gm23100-201ENSMUST00000083455 141 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 189.6 ms