Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm27977-201ENSMUST00000185159 111 ntBASIC3.67□□□□□ -1.82
Trim35Q8C006 Gm28767-201ENSMUST00000188601 114 ntBASIC3.67□□□□□ -1.82
Trim35Q8C006 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim35Q8C006 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.67□□□□□ -1.82
Trim35Q8C006 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trim35Q8C006 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trim35Q8C006 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Trim35Q8C006 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Trim35Q8C006 Gm16355-201ENSMUST00000128606 231 ntBASIC3.66□□□□□ -1.82
Trim35Q8C006 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.66□□□□□ -1.82
Trim35Q8C006 Gm24478-201ENSMUST00000157439 158 ntBASIC3.66□□□□□ -1.82
Trim35Q8C006 Gm22245-201ENSMUST00000082479 103 ntBASIC3.66□□□□□ -1.82
Trim35Q8C006 Snora69-201ENSMUST00000083708 131 ntBASIC3.66□□□□□ -1.82
Trim35Q8C006 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC3.65□□□□□ -1.82
Trim35Q8C006 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 Gm25641-201ENSMUST00000175135 108 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 Gm4036-201ENSMUST00000220842 626 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 Gm22884-201ENSMUST00000083127 140 ntBASIC3.65□□□□□ -1.83
Trim35Q8C006 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trim35Q8C006 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trim35Q8C006 Gm24581-201ENSMUST00000103962 133 ntBASIC3.64□□□□□ -1.83
Trim35Q8C006 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.64□□□□□ -1.83
Trim35Q8C006 Gm23661-201ENSMUST00000122630 87 ntBASIC3.64□□□□□ -1.83
Trim35Q8C006 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.64□□□□□ -1.83
Trim35Q8C006 Mir221-201ENSMUST00000083488 95 ntBASIC3.64□□□□□ -1.83
Trim35Q8C006 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim35Q8C006 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim35Q8C006 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trim35Q8C006 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Trim35Q8C006 Gm24505-201ENSMUST00000157682 126 ntBASIC3.63□□□□□ -1.83
Trim35Q8C006 Gm23152-201ENSMUST00000175322 116 ntBASIC3.63□□□□□ -1.83
Trim35Q8C006 Mir7047-201ENSMUST00000184595 64 ntBASIC3.63□□□□□ -1.83
Trim35Q8C006 Gm27991-201ENSMUST00000184804 137 ntBASIC3.63□□□□□ -1.83
Trim35Q8C006 Gm24259-201ENSMUST00000083740 107 ntBASIC3.63□□□□□ -1.83
Trim35Q8C006 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Trim35Q8C006 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim35Q8C006 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Trim35Q8C006 Mir654-201ENSMUST00000104787 84 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm25105-201ENSMUST00000122477 130 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm24009-201ENSMUST00000157734 93 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm22087-201ENSMUST00000158339 88 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Mir6385-201ENSMUST00000184295 105 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm27392-201ENSMUST00000185041 101 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 AC116319.1-201ENSMUST00000227765 222 ntBASIC3.62□□□□□ -1.83
Trim35Q8C006 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
Trim35Q8C006 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.62□□□□□ -1.83
Trim35Q8C006 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Trim35Q8C006 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.61□□□□□ -1.83
Trim35Q8C006 Mir1899-201ENSMUST00000122798 96 ntBASIC3.61□□□□□ -1.83
Trim35Q8C006 Gm25222-201ENSMUST00000158199 126 ntBASIC3.61□□□□□ -1.83
Trim35Q8C006 Snord15a-201ENSMUST00000083888 148 ntBASIC3.61□□□□□ -1.83
Trim35Q8C006 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Trim35Q8C006 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim35Q8C006 Gm11704-201ENSMUST00000120031 214 ntBASIC3.6□□□□□ -1.83
Trim35Q8C006 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.6□□□□□ -1.83
Trim35Q8C006 Gm15692-201ENSMUST00000152173 352 ntBASIC3.6□□□□□ -1.83
Trim35Q8C006 Gm24244-201ENSMUST00000157317 130 ntBASIC3.6□□□□□ -1.83
Trim35Q8C006 Gm24508-201ENSMUST00000180104 107 ntBASIC3.6□□□□□ -1.83
Trim35Q8C006 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Trim35Q8C006 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim35Q8C006 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm24068-201ENSMUST00000104513 132 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm24937-201ENSMUST00000122597 134 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm22944-201ENSMUST00000158662 133 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm23291-201ENSMUST00000175611 78 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm20693-201ENSMUST00000177431 211 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm27505-201ENSMUST00000185071 110 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Gm45655-201ENSMUST00000211625 160 ntBASIC3.59□□□□□ -1.83
Trim35Q8C006 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Trim35Q8C006 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Gm26007-201ENSMUST00000158798 120 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Gm25838-201ENSMUST00000158920 120 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Gm24624-201ENSMUST00000082617 164 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Gm26202-201ENSMUST00000082910 65 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Gm24523-201ENSMUST00000083965 132 ntBASIC3.58□□□□□ -1.84
Trim35Q8C006 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Trim35Q8C006 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.57□□□□□ -1.84
Trim35Q8C006 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim35Q8C006 Gm22674-201ENSMUST00000104413 131 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Gm24723-201ENSMUST00000158233 132 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Gm24769-201ENSMUST00000158506 129 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Gm25748-201ENSMUST00000175487 70 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim35Q8C006 Gm23736-201ENSMUST00000082553 75 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Mir429-201ENSMUST00000083493 83 ntBASIC3.57□□□□□ -1.84
Trim35Q8C006 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Trim35Q8C006 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Trim35Q8C006 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Trim35Q8C006 Gm25056-201ENSMUST00000157372 62 ntBASIC3.56□□□□□ -1.84
Trim35Q8C006 Gm25010-201ENSMUST00000158403 65 ntBASIC3.56□□□□□ -1.84
Trim35Q8C006 Gm26158-201ENSMUST00000158973 119 ntBASIC3.56□□□□□ -1.84
Trim35Q8C006 Gm26491-201ENSMUST00000179268 121 ntBASIC3.56□□□□□ -1.84
Trim35Q8C006 Gm45245-201ENSMUST00000210082 376 ntBASIC3.56□□□□□ -1.84
Trim35Q8C006 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.56□□□□□ -1.84
Trim35Q8C006 Snord60-201ENSMUST00000082834 78 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms