Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm37579-201ENSMUST00000194291 142 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Mir7215-201ENSMUST00000200383 51 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm25796-201ENSMUST00000082645 163 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm24038-201ENSMUST00000082872 159 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Gm23249-201ENSMUST00000083369 161 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.14□□□□□ -2.07
Shkbp1Q6P7W2 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm24913-201ENSMUST00000157286 107 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm25884-201ENSMUST00000157782 62 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Mir6928-201ENSMUST00000185166 70 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Mir7232-201ENSMUST00000197929 74 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm44478-201ENSMUST00000204875 114 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm45544-201ENSMUST00000211130 88 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Shkbp1Q6P7W2 Gm24468-201ENSMUST00000104489 104 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gm14588-201ENSMUST00000119895 172 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gm23854-201ENSMUST00000158378 108 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gm27446-201ENSMUST00000183963 89 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gm28647-201ENSMUST00000188416 197 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gm23507-201ENSMUST00000083078 107 ntBASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Shkbp1Q6P7W2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm23652-201ENSMUST00000116752 107 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm16265-201ENSMUST00000134558 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm24250-201ENSMUST00000157320 135 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm25836-201ENSMUST00000158918 123 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm23770-201ENSMUST00000178009 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm22832-201ENSMUST00000178022 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm23863-201ENSMUST00000178265 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm24828-201ENSMUST00000178507 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm23052-201ENSMUST00000178633 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm25729-201ENSMUST00000179050 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm25359-201ENSMUST00000179315 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm22624-201ENSMUST00000179913 108 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Mir7016-201ENSMUST00000184308 72 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Mir3961-201ENSMUST00000198795 59 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm45654-201ENSMUST00000210980 123 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm19118-201ENSMUST00000222554 98 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm22283-201ENSMUST00000082556 161 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Gm25357-201ENSMUST00000082745 72 ntBASIC2.11□□□□□ -2.07
Shkbp1Q6P7W2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Gm23390-201ENSMUST00000157393 106 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Mir7225-201ENSMUST00000184178 54 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Mir6376-201ENSMUST00000185149 131 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Gm44308-201ENSMUST00000197080 99 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.1□□□□□ -2.07
Shkbp1Q6P7W2 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm26051-201ENSMUST00000104642 93 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm24478-201ENSMUST00000157439 158 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm22083-201ENSMUST00000157586 102 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm24345-201ENSMUST00000158706 124 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm22638-201ENSMUST00000179674 107 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm42960-201ENSMUST00000202160 241 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm19855-201ENSMUST00000210145 249 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Gm25697-201ENSMUST00000082902 98 ntBASIC2.09□□□□□ -2.07
Shkbp1Q6P7W2 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Shkbp1Q6P7W2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Shkbp1Q6P7W2 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.09□□□□□ -2.08
Shkbp1Q6P7W2 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Gm22228-201ENSMUST00000157364 101 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Gm22332-201ENSMUST00000158072 126 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Gm24394-201ENSMUST00000158141 123 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Mir6377-201ENSMUST00000183760 114 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Snora69-201ENSMUST00000083708 131 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.08□□□□□ -2.08
Shkbp1Q6P7W2 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Snord78-201ENSMUST00000104032 66 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Gm26076-201ENSMUST00000104065 105 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Gm22727-201ENSMUST00000158090 116 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Snora41-201ENSMUST00000082668 132 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Shkbp1Q6P7W2 Gm22772-201ENSMUST00000104451 121 ntBASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Gm11792-201ENSMUST00000120640 168 ntBASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Gm20409-201ENSMUST00000173457 130 ntBASIC2.06□□□□□ -2.08
Shkbp1Q6P7W2 Mir3083-201ENSMUST00000175377 64 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms